G104420


Basic Information

Item Value
gene id G104420
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 4027887 ~ 4028235 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU118737
AAAAAAAAAAAAGTTGCTGTTTGGTTTAAATAGGCAAATGCTTAAAGGGTTAGTTTACCCAAAAATTAAAATTCTGTCATTAATTTCTCACCCTCATGTCGTTCCACACCCGTAAGACTTTTGTTCATCTTCAGAACACAAATTAAGATATTTTTGATAAAATCCGATGGCTTAGTGAGGCCTCCATTGACAGCAAGACAATTAACACTTTCAATGCCCAGAAAGGTACTAAAAGCATATTTAAAACAGTTCATGTGACTACAGTGGTTCAACCTTGATGTTATGAAGCGACGAGAATACTTTTGTGCGCCAAAATAACGACATTATTCAACAATATCTAGTGATGGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU118737 True 349 lncRNA 0.35 1 4027887 4028235

Neighbor

gene id symbol gene type direction distance location
CI01000018_04021370_04027014 HHATL, HHATLB coding upstream 89 4020644 ~ 4027798 (+)
CI01000018_04007742_04017494 GARS coding upstream 10106 4007742 ~ 4017781 (+)
CI01000018_03964459_03964818 NA coding upstream 63006 3963435 ~ 3964881 (+)
CI01000018_03923541_03939515 NA coding upstream 88217 3923541 ~ 3939670 (+)
CI01000018_03883336_03887135 ACAA1 coding upstream 140673 3882762 ~ 3887214 (+)
CI01000018_04029960_04035673 KLHL40B, KLHL40 coding downstream 1535 4029770 ~ 4035718 (+)
CI01000018_04084765_04090616 SEC22C coding downstream 56329 4084564 ~ 4091161 (+)
CI01000018_04234688_04235225 CST14A.1, CST14A.2 coding downstream 206453 4234688 ~ 4236015 (+)
CI01000018_04237268_04237554 NA coding downstream 208855 4237090 ~ 4237554 (+)
CI01000018_04243337_04245807 NA coding downstream 214789 4243024 ~ 4245990 (+)
G104381 NA non-coding upstream 68141 3959531 ~ 3959746 (+)
G104291 NA non-coding upstream 125739 3879048 ~ 3902148 (+)
G104340 NA non-coding upstream 196269 3830483 ~ 3831618 (+)
G104294 NA non-coding upstream 198751 3828397 ~ 3829136 (+)
G104290 NA non-coding upstream 200315 3827365 ~ 3827572 (+)
G104452 NA non-coding downstream 81688 4109923 ~ 4110175 (+)
G104458 NA non-coding downstream 95708 4123943 ~ 4133035 (+)
G104519 NA non-coding downstream 265402 4293637 ~ 4293875 (+)
G104521 NA non-coding downstream 273964 4302199 ~ 4302434 (+)
G104522 NA non-coding downstream 274526 4302761 ~ 4302962 (+)
G104258 NA other upstream 336368 3691089 ~ 3691519 (+)
CI01000018_01924489_01985310 SEMA5A other upstream 2042576 1924489 ~ 1985311 (+)
G102895 NA other upstream 2442225 1582913 ~ 1585662 (+)
CI01000018_04368179_04375192 NA other downstream 341951 4368179 ~ 4375866 (+)
G104670 NA other downstream 727566 4755801 ~ 4759768 (+)
CI01000018_05217404_05218896 NA other downstream 1188445 5216452 ~ 5222616 (+)
G106429 NA other downstream 2853376 6881611 ~ 6886325 (+)

Expression


Co-expression Network