G103478


Basic Information

Item Value
gene id G103478
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 2377922 ~ 2378138 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU117712
CATCTAAGTACAATCTGAATGTACAACTAACTATAATTATTTACCTTTTATTACTTTAGATATTGTTTATTATTTTACCAAATGTGACAAAATGTGTATAATTGTTATGATATTGAGCAATTTATACAATAGAAAATATGTTATCATCATGGTTAATAAGTATATAAAGATATATAATCTTGACATCTGTCTCTGAGGTCCAGCTGTAATGGGTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU117712 True 217 lncRNA 0.25 1 2377922 2378138

Neighbor

gene id symbol gene type direction distance location
CI01000018_02370124_02372215 NA coding upstream 5017 2370071 ~ 2372905 (+)
CI01000018_02344327_02354633 EZH2 coding upstream 22509 2344327 ~ 2355413 (+)
CI01000018_02338151_02342822 PDIA4 coding upstream 35033 2338151 ~ 2342889 (+)
CI01000018_02332183_02336865 NA coding upstream 40999 2332183 ~ 2336923 (+)
CI01000018_02327424_02330396 NA coding upstream 46962 2327424 ~ 2330960 (+)
CI01000018_02864151_02865976 NA coding downstream 486013 2864151 ~ 2865978 (+)
CI01000018_02868921_02905963 NA coding downstream 490783 2868921 ~ 2905990 (+)
CI01000018_03009909_03030542 CSPP1 coding downstream 631771 3009909 ~ 3030609 (+)
CI01000018_03144746_03157987 NA coding downstream 766516 3144654 ~ 3158243 (+)
CI01000018_03168822_03281088 PREX2 coding downstream 790684 3168822 ~ 3281088 (+)
G103457 NA non-coding upstream 71809 2305840 ~ 2306113 (+)
G103363 NA non-coding upstream 241355 2134175 ~ 2136567 (+)
G103347 NA non-coding upstream 294612 2083106 ~ 2083310 (+)
G103386 NA non-coding upstream 417936 1959700 ~ 1959986 (+)
G103385 NA non-coding upstream 419403 1958263 ~ 1958519 (+)
G103479 NA non-coding downstream 116 2378254 ~ 2378470 (+)
G103480 NA non-coding downstream 1439 2379577 ~ 2379869 (+)
G103482 NA non-coding downstream 5967 2384105 ~ 2384329 (+)
G103483 NA non-coding downstream 6361 2384499 ~ 2385857 (+)
G103485 NA non-coding downstream 14038 2392176 ~ 2401095 (+)
CI01000018_01924489_01985310 SEMA5A other upstream 392611 1924489 ~ 1985311 (+)
G102895 NA other upstream 792260 1582913 ~ 1585662 (+)
G104258 NA other downstream 1312951 3691089 ~ 3691519 (+)
CI01000018_04368179_04375192 NA other downstream 1992048 4368179 ~ 4375866 (+)
G104670 NA other downstream 2377663 4755801 ~ 4759768 (+)
CI01000018_05217404_05218896 NA other downstream 2838542 5216452 ~ 5222616 (+)
G106429 NA other downstream 4503473 6881611 ~ 6886325 (+)

Expression


Co-expression Network