CI01000018_02332183_02336865


Basic Information

Item Value
gene id CI01000018_02332183_02336865
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 2332183 ~ 2336923 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000018_02332183_02336865.mRNA
GTTCAGCAAAACAAAGACTCTTCTGTGGACTCATTCTGTGTTCTTTTCTCTTGTCTGCTGTGGCTTTGTACTGCATCCAGCAATGATACTCATAATTGCTGTCACAGTGTCTCTGCTACATCGAAAGAGACCGAACTGGTTCCACAGTCTAAGTTTAACCGAGTCTGTCACTGAGTTATCGAAACACGGGGACCGAAAAAATGAGAATGTCTTTGTTAGCAAATACCAGCAGTCTCATTTTGAAAAGAGAGCCAGGTATCTGCGTCTAGTGAAGCCACCGAATTCAAGAGAGTTGAAGTGTGTGAGACGCCAGATCAAGAAACAGACTCTCCTTCACAAAACCACAAGGGATTTGGTGTTACACCTAATCATGCTGTCGACGATTCTATTTGTGACTTATGGAAAGTCTGCCAATGACTACAAGTACTGTTTGAATCAGGCTATCAAAACTCATTTCACAAAGAGTCCACAAAATTCATTTCACTCCATCCAAAAACATGACGATTGGTGGAAATGGACAACAAGCACTTTCCTAGAGAGACTATACGACAGTGCCAACTGGCATGATAATGGAACAGAAAATGAAACTTCAGATTTCAGAAGTGCTTATTCTCTTATTGGGAGTCCAGTCATTAGAAAGATCAAGAGCACATTTAACTCATCATGCCAGATCTTGAATTTGTTGGGCAAGAACAATGTGAAATGCTCTGATAACCAATCTGTGGCAAAGAGACACTCACTTTGTGGGAAACTTGGGTGTTATGAGGGAGAAAGAGTGAGTGTGAGCCTGGGAAAAACAAGGTTAAAAGCAATCAAGTCAATTAAAAAGCTTCTGGATACCAGCTGGATGACACCATTCACCCAAATTGTGATGGTCCAGTTTATCCTGTACAACGGGCCCAGTAACCTCTTCACGTCAGTCACCATTCTAGTAGAGCAAACCTCAACAGGAGCTCTGATACCCTCAGCAAGTGTGCAGTCCACTAGACTCTACAATTTCCCAGCTGCCCTTGACTACGGTGTTATGACCTGTGAGCTTCTTTTCTTTTCATTCATCCTGCTTCATATGTATTGGCAAATATATGTTATGACTCAAAGAGGATGGCTTTACTGGAGAAACATTTGGAGCTGGCTTGAGGTGACAGTTATCATCTGCAGTCTTTTACGATATATCTGCTCTGCATACAACTTTATGCTAAAAACAGAGATGATTGACTTCCTGCAGAAGGAGGATTTTACATTACCTGTTGATCTAAGCCCCATCTTCTTTTGTGAGCAGGCACCTGGTGTTATTGTCACAGTAGCCCTCTCCGGTCTCCGCAACCTGATCTTTTATTCATTCCCCTTTACTTGTATCACCAGATCCGCTCATTTGCTCTTCACTCATTTCTTTTGCTTGAGCCACTTTAGTGACATTTACCTCCAAAACCAAGTCCCATCAACACTTTATTTTGGAGCAATATTTTGCACTGTGATTCCACTGAATGCTATGGTAATTTCCACCCTTACAATTTTTGTGAAACAAACAAAGACAACTAAAAAAAGAAAACATTTACTGACTGTCTTTGAGCTGATCTATTATGTCAAAGACATGGCTTTACTCATGATTGGCAAAGCCAGTCAAAAGTCAGCTGACCATCATGTCCACGCTAATAGCTTTTATTTAGCAGAGTTTGAGGATCTCATGGATGAGCTGTTGTTTCATCTCTGCAGCATGTCAGACAGTCTCCACAACACCCTGCCAGCAAAAGAACATCTATTTGAAACCCAGAGCAATTTTTCTTTCCCACTTTCTGAGCACGTCTATTGCTCAGACTCAGAGGTGATTATTTTACTTTTGCACAGCACTCACATTATTCACGCCACACTGTACACATTTATGTGACTTACGTGTGCATTTTGTTATTAGTTGTTGTAGTATACAGTGTTAGTATTTAGTGCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000018_02332183_02336865.mRNA True 1943 mRNA 0.41 13 2332183 2336923

Neighbor

gene id symbol gene type direction distance location
CI01000018_02327424_02330396 NA coding upstream 1223 2327424 ~ 2330960 (+)
CI01000018_02299868_02308426 SPAG6.L, SPAG6, PF16, BRAFLDRAFT_281199, SPAG6L coding upstream 23688 2299868 ~ 2308495 (+)
CI01000018_02293913_02296864 BMI1, BMI1A coding upstream 34420 2293790 ~ 2297763 (+)
CI01000018_02287327_02289682 NA coding upstream 42467 2286127 ~ 2289716 (+)
CI01000018_02260011_02260307 NA coding upstream 71321 2259902 ~ 2260862 (+)
CI01000018_02338151_02342822 PDIA4 coding downstream 1228 2338151 ~ 2342889 (+)
CI01000018_02344327_02354633 EZH2 coding downstream 7404 2344327 ~ 2355413 (+)
CI01000018_02370124_02372215 NA coding downstream 33148 2370071 ~ 2372905 (+)
CI01000018_02864151_02865976 NA coding downstream 527228 2864151 ~ 2865978 (+)
CI01000018_02868921_02905963 NA coding downstream 531998 2868921 ~ 2905990 (+)
G103457 NA non-coding upstream 26070 2305840 ~ 2306113 (+)
G103363 NA non-coding upstream 195616 2134175 ~ 2136567 (+)
G103347 NA non-coding upstream 248873 2083106 ~ 2083310 (+)
G103386 NA non-coding upstream 372197 1959700 ~ 1959986 (+)
G103385 NA non-coding upstream 373664 1958263 ~ 1958519 (+)
G103478 NA non-coding downstream 40999 2377922 ~ 2378138 (+)
G103479 NA non-coding downstream 41331 2378254 ~ 2378470 (+)
G103480 NA non-coding downstream 42654 2379577 ~ 2379869 (+)
G103482 NA non-coding downstream 47182 2384105 ~ 2384329 (+)
G103483 NA non-coding downstream 47576 2384499 ~ 2385857 (+)
CI01000018_01924489_01985310 SEMA5A other upstream 346872 1924489 ~ 1985311 (+)
G102895 NA other upstream 746521 1582913 ~ 1585662 (+)
G104258 NA other downstream 1354166 3691089 ~ 3691519 (+)
CI01000018_04368179_04375192 NA other downstream 2033263 4368179 ~ 4375866 (+)
G104670 NA other downstream 2418878 4755801 ~ 4759768 (+)
CI01000018_05217404_05218896 NA other downstream 2879757 5216452 ~ 5222616 (+)
G106429 NA other downstream 4544688 6881611 ~ 6886325 (+)

Expression


Co-expression Network