CI01000018_02260011_02260307


Basic Information

Item Value
gene id CI01000018_02260011_02260307
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 2259902 ~ 2260862 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000018_02260011_02260307.mRNA
ACATATGTGCACACAGACACACAGTCTTTCTCACTCTGCCAGTGTGCTGAAAATGACACGCTGGTGCGAGTCTCTGTGGGCGGAAAATGTAGACCGAGGTGACTGAAGGATGGAGACGCTTCTGGAACAGTATCTGCTCACTGCTGTTACCTCTCTGTACCCCTTTAACAAGAAACGAGTAACGATAAACTCAATAAAAGCCCTGTCGTATTCGTCCGTCTGTGTATTTAAAGGCGTCACTTGTTTCAAAGCTGAAGCGATCGGACATTTGTGCACCATGAAGGCCTTCTCCGCATCCCGATCTTTAGCTTCCCCTGTGAGGAGGCGTCCCAAAGGTCCACAAACTGTCTCACTGACCCTGCTGCACTCTTTGAAGAGCAACTACCTCTCAAGCCAGGACACATAGACCAGGCCCTGAACCCAAGTGCCTGGCCCCATCTCCAAGCTCTCAGCGAGGGGCCGCGTGCTGGAGGCGCTGCCAGTCTCTTCCCTCCCTTCCCCCCTTTTTTTTTTCCCCCAGTCAATCCATTTTTGTGAAATTAATTAATACCAATCGGCGTCACTCAGGCAATACCAGTTCAGAGAGTCACAGATCTCTGCCTGTACAGTGATTACACTGAAGAAGACAAAAACTGATTTCGAATGTTTGCTGCATTGATCATTTTTGAAGCCACCTTTCTATTGTTCTTTTTTATTTATTTGCATTCGTTGCATGTTGGGCGCAAGGTAATATATTTTAACGCTCAACTCGCAAAATGTTTTTATACTACTGTACAAAATTCTCAACTCTTTTGAGTCTTGTAAACATTTTGATGAACATGTCTGGTGTTTGAAGTTATAAGAAAAGAAAAAAACCTACTTGATAATTTTGTGGTCTTGTAAATACGCCTGTTTTTCCCCTTTTCCTTTTGTTGCTATGTAAATCAACAGATGCATATTGGATTAAGAATAAGCTGTCAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000018_02260011_02260307.mRNA True 961 mRNA 0.44 1 2259902 2260862

Neighbor

gene id symbol gene type direction distance location
CI01000018_02205930_02256958 MLLT10 coding upstream 2944 2205212 ~ 2256958 (+)
CI01000018_02203236_02203803 NA coding upstream 55684 2202273 ~ 2204218 (+)
CI01000018_02150486_02181595 PIP4K2AA, PIP4K2AB, PIP4K2A coding upstream 78283 2150486 ~ 2181619 (+)
CI01000018_02115961_02124173 ZFX coding upstream 135061 2115961 ~ 2124841 (+)
CI01000018_02104142_02113293 EIF2S3L, EIF2S3.S, IF2G, EIF2S3Y, EIF2S3X, EIF2S3 coding upstream 146356 2103703 ~ 2113546 (+)
CI01000018_02287327_02289682 NA coding downstream 25265 2286127 ~ 2289716 (+)
CI01000018_02293913_02296864 BMI1, BMI1A coding downstream 32928 2293790 ~ 2297763 (+)
CI01000018_02299868_02308426 SPAG6.L, SPAG6, PF16, BRAFLDRAFT_281199, SPAG6L coding downstream 39006 2299868 ~ 2308495 (+)
CI01000018_02327424_02330396 NA coding downstream 66562 2327424 ~ 2330960 (+)
CI01000018_02332183_02336865 NA coding downstream 71321 2332183 ~ 2336923 (+)
G103363 NA non-coding upstream 123335 2134175 ~ 2136567 (+)
G103347 NA non-coding upstream 176592 2083106 ~ 2083310 (+)
G103386 NA non-coding upstream 299916 1959700 ~ 1959986 (+)
G103385 NA non-coding upstream 301383 1958263 ~ 1958519 (+)
G103384 NA non-coding upstream 301884 1957789 ~ 1958018 (+)
G103457 NA non-coding downstream 44978 2305840 ~ 2306113 (+)
G103478 NA non-coding downstream 117060 2377922 ~ 2378138 (+)
G103479 NA non-coding downstream 117392 2378254 ~ 2378470 (+)
G103480 NA non-coding downstream 118715 2379577 ~ 2379869 (+)
G103482 NA non-coding downstream 123243 2384105 ~ 2384329 (+)
CI01000018_01924489_01985310 SEMA5A other upstream 274591 1924489 ~ 1985311 (+)
G102895 NA other upstream 674240 1582913 ~ 1585662 (+)
G104258 NA other downstream 1430227 3691089 ~ 3691519 (+)
CI01000018_04368179_04375192 NA other downstream 2109324 4368179 ~ 4375866 (+)
G104670 NA other downstream 2494939 4755801 ~ 4759768 (+)
CI01000018_05217404_05218896 NA other downstream 2955818 5216452 ~ 5222616 (+)
G106429 NA other downstream 4620749 6881611 ~ 6886325 (+)

Expression


Co-expression Network