CI01000018_02287327_02289682


Basic Information

Item Value
gene id CI01000018_02287327_02289682
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 2286127 ~ 2289716 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000018_02287327_02289682.mRNA
CTATAAATTGACTGGCATTAGTTAATTGTCACAGATTGCTTTGTACACACAATTTATGCAGATGTTTTGTCTAAACTATGACTATAGTAAAATATTACGACGTCTTTCTGACCTCTCTAATTCCATTTACTATTTTATAAAATTGGACCATTACTTCAAAAATCTTAAAACGCAAAGGGACAAAATTAATTGTTTATATACATAGTAAAGATTAGAGTCAAAATAGACTTTACCGGATGAAATATGAGTTATTGTGTTTTAAAGAACGCAGAAACGTTCTAAAGAACCTATATGACATCTAAAACTTTTTAATATATATATAAAAAATAGCCACTAGTGAAAAACCTTTTAGGCTACAATAGGCGAATGATTAGGGAATAGAACAGAAATGATTACGAAAAACAAAATGGCGTAATAGCTGTAAACGCGTCTCATTAAAAATGTAAAATAAAATATATTTTTTTTAATTATTGCGCTTTTGGAAATTGTAGATTTATTTGAACGTACTGTATTTTCATGGTGTAGCCTAGTAGGCTATTTATGTAAAATTCTAAAGTTTCGGTCAAAAACAACATGTTAACGTTGTATTTGTAGCTAATAAAAGAGTTCTTCAAAAGCAGTTTATCTTCCCTAATTGACTTCGGCAACTGATTAACAGAGCTAAACTGTCGCTCATCAGAATTGATCGTGCCGAGTAGACACATAGCTACAGAATATCTCATCGCTCAGCAAATTGTAAGGTGTGTAAAAGCGGTATTCAATTTGATGAATTCAAAGCAGTTGGCTATAAGGAAGCTGCGTTAAGAAAGAACCGAGCTTGCCATGGGTACCGCCACTAGTCCTTTAAAAATTGTAACTCCACAAGAATCATTCTAATATAATTTGAAATATATAGACAGGTTATACAGCAGTAGAATTACGTATGCGATGCACGTGTCTCCAGATTGACAAACGTTTACCGGCGAGTGTCTTTTATCCTTTAAAGAGAGATCTCGCCAGAGTTATATTCAGCCGTTATGTGAGGATTTTTTTTTTTTTTTTTTTTTTTTAATTTTTTATCCCGATTATATGGCAATGACATAATGCAATAATGTAAACATCAAGTGTGCGTTGTGTGTCAGTGTGTCTCTATTCTCCGACAATTCAAGTCCTGAGATCAGCTGACGCGCTCATGTGACCAAGGCTAGTCTGCAGCTCAAAATGGAGTTGTCGGAATCAGTGATGAAAGGACTTCAAACCGTGGCCGATCCAAATGTGTTCGACCTGAAATCATTTACGATATTCACAGAGGTCGTATTCGACAGTCTGGTCTCGCCTCGACGCGAAAGTTTTCTAGGTCACCCAGAATTAAAGCACATCGATCAGACTACCCTGAAACACTGTCATACCGCGGCAACGACCTTCATTCTGGAAGGAGTAAAGCAAAATGCAGATAAATCAACGATTAGCTCGTGTCTTGAAGACGTCAGGTTCCAGATTGAAAGAGTGGATATATTTTATACTTCATTCCAGAAAAACAAAACAAAATTGGAATATTTGTTGTCAAGAGGGGTGCCGCTTCTTCGGAAATTAATTTTAGTTGCACCATGGAGCAACTTCAGGGGTGACACAAAGGTGAATTGTCCAAAAGATCAAGTCATAAAATTCTCATGCACTCAATCATCGTCACATCACTTAACAAATATCCTAAAAGCTTATTTGTTGACCAACAAGTTTTAGCGGACCGAAGACAAAAAGGTTGCACAGCGTGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000018_02287327_02289682.mRNA True 1753 mRNA 0.36 6 2286127 2289716

Neighbor

gene id symbol gene type direction distance location
CI01000018_02260011_02260307 NA coding upstream 25265 2259902 ~ 2260862 (+)
CI01000018_02205930_02256958 MLLT10 coding upstream 29169 2205212 ~ 2256958 (+)
CI01000018_02203236_02203803 NA coding upstream 81909 2202273 ~ 2204218 (+)
CI01000018_02150486_02181595 PIP4K2AA, PIP4K2AB, PIP4K2A coding upstream 104508 2150486 ~ 2181619 (+)
CI01000018_02115961_02124173 ZFX coding upstream 161286 2115961 ~ 2124841 (+)
CI01000018_02293913_02296864 BMI1, BMI1A coding downstream 4074 2293790 ~ 2297763 (+)
CI01000018_02299868_02308426 SPAG6.L, SPAG6, PF16, BRAFLDRAFT_281199, SPAG6L coding downstream 10152 2299868 ~ 2308495 (+)
CI01000018_02327424_02330396 NA coding downstream 37708 2327424 ~ 2330960 (+)
CI01000018_02332183_02336865 NA coding downstream 42467 2332183 ~ 2336923 (+)
CI01000018_02338151_02342822 PDIA4 coding downstream 48435 2338151 ~ 2342889 (+)
G103363 NA non-coding upstream 149560 2134175 ~ 2136567 (+)
G103347 NA non-coding upstream 202817 2083106 ~ 2083310 (+)
G103386 NA non-coding upstream 326141 1959700 ~ 1959986 (+)
G103385 NA non-coding upstream 327608 1958263 ~ 1958519 (+)
G103384 NA non-coding upstream 328109 1957789 ~ 1958018 (+)
G103457 NA non-coding downstream 16124 2305840 ~ 2306113 (+)
G103478 NA non-coding downstream 88206 2377922 ~ 2378138 (+)
G103479 NA non-coding downstream 88538 2378254 ~ 2378470 (+)
G103480 NA non-coding downstream 89861 2379577 ~ 2379869 (+)
G103482 NA non-coding downstream 94389 2384105 ~ 2384329 (+)
CI01000018_01924489_01985310 SEMA5A other upstream 300816 1924489 ~ 1985311 (+)
G102895 NA other upstream 700465 1582913 ~ 1585662 (+)
G104258 NA other downstream 1401373 3691089 ~ 3691519 (+)
CI01000018_04368179_04375192 NA other downstream 2080470 4368179 ~ 4375866 (+)
G104670 NA other downstream 2466085 4755801 ~ 4759768 (+)
CI01000018_05217404_05218896 NA other downstream 2926964 5216452 ~ 5222616 (+)
G106429 NA other downstream 4591895 6881611 ~ 6886325 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location