XLOC_000808 (si:dkey-27j5.10)


Basic Information

Item Value
gene id XLOC_000808
gene name si:dkey-27j5.10
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 57208005 ~ 57213362 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00001295
AAGATCATCTCTTCACACGCTCAGTCCATCAGTCGCTGTTGATCCTCTGCTCTTCAACACGATAGATTTGATGCTGATGTGGCTCAGAAtggctcctgctcttcatctgatCTTTCTGCTCATCATTCACAGGGTTTCTGCTGCTGATTGGGGTGTGAATTACAGTCCTTCACAATACTGTGCACTACAGAACTCAACAATGACAATCAGCTGCACTTTTATATACCCGACTACTGGATATCAGATCATGAAAGCATTCTGGAACATAGACCAGGTAAAACCTGATGGAGTAGAGTTTGCAGATCTGTCTGTGAACCCTGAATACAGTCAGAGGCTTCAGTATCTGGGAAATAAACAGCAGAACTGCACCGTCAGACTGAGTCATGTGACAAAGAAAGATGAACACGACTATCTTTTCAGATTCACTACAAATGTAACTACTGGGAAAATTATTGGTATTCCAGGAGTGGTTCTCTCTGTCACAGatcTTCAGCTGGAGTCTCCTGAGAGAGTGACAGAGGGAGATTCAGTCCGTCTGACATGTAGAAGCAGCTGTAAACTGACTGACACACCAACATTCATCTGGTACAGAAACTCACACACATTGACTAATATTGGAGATGAACTCAACATCAGTCCAGTCAACAGAACAGAAGCAGGACACTACAGCTGTGGTGTGCAGGGACAAACCTACATCTCTCCTGCTGTTTATCTCAATGTCACATATCCTCCAGATACTCCTGTGATCTCCAACAGATCTGCTGTGATAATgtctggagattcagtgactctgaactgcagcagcgactcaaaccctcctgcagaAATCAGCTGGTATAAAGCAAATAAATCTCTGAGTTCTGGAAGAATCTTCAACATCTCCAAGATCAGCTCTGatgacagtggagaatacaagtgTAGAGCCAGAAATGACCATGGAGAGAAATACTCTGATCCTGTGACTTTAGATGTTCAGTATCCTCCCAGGAACGTCTCAGTGTTCGTCACTGATTCTGGTCAGCTTTTTTCTGATTCAGTGAGTCTGATGTGCATCattgactcaaaccctcctgctctGAGCTTCAGCTGGTTTAAGGAGAATCAAAGCTCAGCTGTTGGATCTGGACAGAGTTTCAGTGCAGTACAGAGTGGACGCTTCTACTGTGAGGCTCACAATCCACATGGAGCTCAGAGATCAGACGCCGTCACTGTCACTG

Function

symbol description
si:dkey-27j5.10 Predicted to be located in membrane. Predicted to be integral component of membrane.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000094157

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00001295 True 1217 mRNA 0.45 6 57208005 57213362

Neighbor

gene id symbol gene type direction distance location
XLOC_000807 si:dkey-27j5.11 coding upstream 5659 57198387 ~ 57202346 (+)
XLOC_000806 si:dkey-27j5.9 coding upstream 12190 57187794 ~ 57195815 (+)
XLOC_000805 si:dkey-27j5.6 coding upstream 27101 57176256 ~ 57180904 (+)
XLOC_000804 si:ch73-94k4.5 coding upstream 47351 57151926 ~ 57160654 (+)
XLOC_000803 si:ch73-94k4.4 coding upstream 62502 57145072 ~ 57145503 (+)
XLOC_000809 NA coding downstream 931 57214293 ~ 57214954 (+)
XLOC_000810 si:dkey-27j5.10 coding downstream 4939 57218301 ~ 57224222 (+)
XLOC_000811 mycbpap coding downstream 56079 57269441 ~ 57317797 (+)
XLOC_000812 epn3b coding downstream 118451 57331813 ~ 57340192 (+)
XLOC_000813 b3gntl1 coding downstream 134526 57347888 ~ 57365052 (+)
XLOC_000801 NA non-coding upstream 87500 57116265 ~ 57120505 (+)
XLOC_000789 NA non-coding upstream 191225 56879466 ~ 57016780 (+)
XLOC_000794 NA non-coding upstream 263616 56939347 ~ 56944389 (+)
XLOC_000788 NA non-coding upstream 329371 56873097 ~ 56878634 (+)
XLOC_000787 NA non-coding upstream 350540 56851035 ~ 56857465 (+)
XLOC_000815 NA non-coding downstream 195305 57408667 ~ 57436117 (+)
XLOC_000816 NA non-coding downstream 205986 57419348 ~ 57433416 (+)
XLOC_000818 NA non-coding downstream 327754 57541116 ~ 57565236 (+)
XLOC_000819 NA non-coding downstream 496936 57710298 ~ 57712236 (+)

Expression


Co-expression Network