CI01000019_03000691_03020851 (TRHDE)


Basic Information

Item Value
gene id CI01000019_03000691_03020851
gene name TRHDE
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000019
NCBI id null
chromosome length 5832599
location 2999635 ~ 3020851 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000019_03000691_03020851.mRNA
ATTCGGCTGTACGCCAGGCCTGACGCCATCCAGAGCGGATCGGGGGACTACGCTCTGCACATCACCAAGAGACTCCTGCAGTTTTACCAGGATTACTTCAAAGTCAAATATTCCCTCCCAAAATTAGCATCCAGGGAGCCGCGGGCCGCCATCGGGAGAAAGAGGGAGAGAGAGACAATGGTGCATGAAGATGAACGATGGAGGGCAAAAAAGCGGGAATGTTTGGATGGACTGATGGTGAAAGCTCGAGTGGATGGGGTGAATGAGCTCTGGTCCGGTGAGCAAGGAAGACTTTATGGTTTTAATTGTCTCGACCCTGAGAGGGCAAACGGCCGGCCTTGACCAATCACAGTGCTCTGTCAGCCAGTGGCTGCTGCCTGTGGCTACAGTGGCTAAATCTATAACAGGCTGCTATAAAAAGCACATCGCACACACTGAACCCTGACAAAACAATGAGAGAGCAATGCTAATTGCACCGTCATCCTCCCAAAGACTGATAAGACAAGCTTCAGCAAACTGTACTGTTCAAAGTCTAAAACTGTTTCTGCTAATATTTGATTTGAATGAAATGCTTGAAGTGTGAACAAGCACCTGACAGAAAGAACTGAAGGGGAATTCATATTTCTAATTGGCTGTGTGGTTGGACTGAATTAGCCAATCAGCAAGCAGTATGGGTGTTTTGTCAGCATGCAGTGTTGTGCTGAACATACATATGTTTTGAATTGCTTTGAACTGAATGCTGCAATTTTAGGTCTGCAAAAGTTATCATGCAGTTTTTTTTTTTTTTTTTTTATCATGTTGCTTTCCCTTTTTACCTTTCAAAAGTAAATAATACTTTTATTCAGCAAAGGTTCCATTAAACTGATCAAAAGTTAAGACATTTATAATGTTACAAAAGATTTCTATTGCAAATAAATGTTGTTTTGAACTTTCTATTCATCAACAACTAATGACTGTTGAAAATTCTGCTTTGCCATGATAAGAATAAATTCGACTTTAAAATATAAATTAGCCTTGGTGAGCATAGGAGCTTAGGTGATATTTGAGGATGCAAATTCAGAGCTGCTAACGGTGAAGATCACTAAAAAGACGGATCAATAGAATGTGATTCATGAAAATCGTCACAGCGACTCCAGCACAGCACATTAACCTCTTAACAGGCTAGGAATAATTAGCCCTTAAGCTTGTGTTTTGTGATTTATACACCAAACAGCACATTGATTTATTCTGCTGAAAAATGCAAAAAGAAAGACCTTAAGGGCCCAAGCGTCAACACATATTTGTTGAATCGCTCAGGAAGTTGAAGCAAATAATCAGGCTGGTTAGATTCGAGAGTAATTATATTAATAATTTCATGTGTCATGTGTTATTAGAATACCCGCTTGAAGTCAAAATAAA

Function

symbol description
trhde Predicted to enable metalloaminopeptidase activity; peptide binding activity; and zinc ion binding activity. Predicted to be involved in several processes, including peptide catabolic process; proteolysis; and regulation of blood pressure. Located in extracellular exosome.

GO: NA

KEGG:

id description
K01306 TRHDE; pyroglutamyl-peptidase II

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000019_03000691_03020851.mRNA True 1398 mRNA 0.40 2 2999635 3020851

Neighbor

gene id symbol gene type direction distance location
CI01000019_02907262_02983656 NA coding downstream 13696 2907170 ~ 2985939 (-)
CI01000019_02893150_02903846 NA coding downstream 95709 2891564 ~ 2903926 (-)
CI01000019_02601366_02629849 NA coding downstream 368486 2601059 ~ 2631149 (-)
CI01000019_02502701_02503852 NA coding downstream 495761 2502223 ~ 2503874 (-)
CI01000019_02485969_02486810 NA coding downstream 512789 2485314 ~ 2486846 (-)
CI01000019_03055727_03057818 NA coding upstream 34603 3055454 ~ 3058001 (-)
CI01000019_03122047_03127637 MDM2 coding upstream 100691 3121542 ~ 3127637 (-)
CI01000019_03135155_03138908 NA coding upstream 113999 3134850 ~ 3138908 (-)
CI01000019_03319532_03331126 NA coding upstream 298298 3319149 ~ 3331313 (-)
CI01000019_03458890_03473706 GNAI1.L, GNAI1 coding upstream 437894 3458745 ~ 3473706 (-)
G109693 NA non-coding downstream 40802 2958574 ~ 2958833 (-)
G109651 NA non-coding downstream 190764 2807241 ~ 2808871 (-)
G109625 NA non-coding downstream 238106 2760848 ~ 2761529 (-)
G109558 NA non-coding downstream 250507 2706363 ~ 2749128 (-)
G109704 NA non-coding upstream 11976 3032827 ~ 3033199 (-)
G109706 NA non-coding upstream 23025 3043876 ~ 3044079 (-)
G109715 NA non-coding upstream 50496 3071347 ~ 3071879 (-)
G109753 NA non-coding upstream 121853 3142704 ~ 3142932 (-)
G109437 NA other downstream 658877 2340203 ~ 2340758 (-)
CI01000019_01503557_01515831 NA other downstream 1481798 1503466 ~ 1517469 (-)
G107820 NA other downstream 1520494 1478851 ~ 1479141 (-)
G107779 NA other downstream 1575818 1423565 ~ 1423817 (-)
CI01000019_03618642_03619707 NDUFB2 other upstream 597537 3618388 ~ 3619973 (-)
G110029 NA other upstream 840150 3861001 ~ 4015766 (-)
CI01000019_05571685_05572535 LAMTOR4 other upstream 2550089 5570940 ~ 5572535 (-)

Expression


Co-expression Network