CI01000019_03544753_03545061



Basic Information


Item Value
gene id CI01000019_03544753_03545061
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000019
NCBI id null
chromosome length 5832599
location 3544618 ~ 3546353 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000019_03544753_03545061.mRNA
ATGCACTTATGTTGACTATGAACACACCCTGTGCAGTGCGCTCATACCTCACTGAGTCAGACATGCACTGTAGATGTCTTGTACAAAGTTCCTATCAATCTTTCACATGATTCATGTATAAGACATGAGCAGAGAGACTGTGCTATTCTTACTCGGTTCTTTGTCCTTCTGCACTCTCTCTGCTACAAAACAAACATATTATTAATATATAATTATGAACTACATGTATTCTTATTTTCCAAGAGTGTTCTGGTCAGAGAAGGCTGTCTGTTCTCCCTGGAGCATGAAGCAAAAGTTATTCCACAGGAAATCAAACTTCTCCCCATGTATTATTGAACTTCTGTTGTCCCATAATAGAATATAGAGGAGAGAAACACAGGGAAGTGTCCATTCATTCTTTTGTTAGAAGTAAAAAGAAGCATCCATATCTTTGAGGTACCACTAGCCTGACATTCCTATTACATTATACAAGACGTCCTTGTGTAAAGGTAAAATAATGACTCAGACTGGACAGGAGCCATTGTTTATACGGCATTGGTTAAAATCATAACTGACTGGATCAATGTCATGCCACTTTCTCAGACTAATTAACTAGAAGACATACAGGAGGCCTTTAAGGAAAAAGCTTTCAAGCATAACTGTTATGACATAACCGTTAAAATATGTATTTTAACTGGCTGCTTTTGAAACACTGTTGCTTTAACACTATATCAAAGACATTTCCTCACACAGAAAGTGGCTAATGTTTCAAATGTGAAAAATGTTGAACTTTTAAAGGAATGTTGTGGGTTCAAATACAAGTTGAGCATTATCAAAATCTGAAGAAAGGTGTCAATTACCACAGATTATTTAGAATTGTCCCTTATTTTGTAAAACTGCATGCACAGTAATGCATTTAAAATGGATTATGTATGGATAATGGATTACAATAATGCATTATTTTAGGTATAAAGTTATACAAATTGTCCTTCTACAGCTAAAACTACTTTACAAGGTGAATTATAGTAACTTACCAATATAATTCGTGTCATTTGCACATATAGGGTTAGTAGTCTCATATCTTACGTAGTAATAAGAATCTTTATTTATTAAGAATATGATTTTAAGTGCCCCATTCCTGTAAGCAATCAACCTCTATTTTCAAACTGAATATTTTTCTTGCTCCTACTGTACTTTATAAAATAAAAGAACATGAATGAAGCCTTTAAAATCTAGTTTTTCCATCAGCATCCTTTACATTTCCTTCACCTTGTCTTTGCAGGTGGGCTGGTCTGGGTGTCTCCTCAGCAGTCATGGGGAGGTCAGGAGCGCTCTGGGTTTGGTCTTTGGGGACGAGCGTGCAGTTGTTCCTTCCCCTCGTCCTCTGTGTCACCTGCATCCATGGTCTTTCTCCACCACAGCCACGAGTCCTCCTGTCATTTCAAGGTGAGGTCACTTCCCTTGATAAAAGCATTCTCGTCAGAGTGCTTTAAACCTGATTGAGGGCTCCATTTGTTACTCATTACATCCTTGTGCTACTTTCATGAGTGTTCAACATTGCTAAGAAACTTTTTTTTTTTTTTTTTACAAAGAACTAGCTGAAATGAAAATGCTTTTACTTTATTAAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000019_03544753_03545061.mRNA True 1607 mRNA 0.36 2 3544618 3546353

Neighbor


gene id symbol gene type direction distance location
CI01000019_03487868_03518631 SEMA3C coding downstream 25765 3487824 ~ 3518853 (-)
CI01000019_03458890_03473706 GNAI1.L, GNAI1 coding downstream 70912 3458745 ~ 3473706 (-)
CI01000019_03319532_03331126 NA coding downstream 213305 3319149 ~ 3331313 (-)
CI01000019_03135155_03138908 NA coding downstream 405710 3134850 ~ 3138908 (-)
CI01000019_03122047_03127637 MDM2 coding downstream 416981 3121542 ~ 3127637 (-)
CI01000019_03618642_03619707 NDUFB2 coding upstream 72043 3618388 ~ 3619973 (-)
CI01000019_03675261_03718563 LHFPL3 coding upstream 128908 3675261 ~ 3718563 (-)
CI01000019_03734168_03738347 MGC84218, GUCA1A coding upstream 187090 3733443 ~ 3738473 (-)
CI01000019_03774441_03774909 LLPH coding upstream 227778 3774131 ~ 3775485 (-)
CI01000019_04049137_04091649 ACSS3 coding upstream 502188 4048541 ~ 4091649 (-)
G109895 NA non-coding downstream 61632 3481996 ~ 3482986 (-)
G109794 NA non-coding downstream 226597 3313667 ~ 3318021 (-)
G109843 NA non-coding downstream 252816 3288087 ~ 3291802 (-)
G109766 NA non-coding downstream 375543 3168328 ~ 3169075 (-)
G109758 NA non-coding downstream 388081 3156306 ~ 3156537 (-)
G109897 NA non-coding upstream 6265 3552618 ~ 3552853 (-)
G109960 NA non-coding upstream 19466 3565819 ~ 3566018 (-)
G109959 NA non-coding upstream 158793 3705146 ~ 3710775 (-)
G109981 NA non-coding upstream 192417 3738770 ~ 3741994 (-)
G110007 NA non-coding upstream 256095 3802448 ~ 3803177 (-)
G109437 NA other downstream 1203860 2340203 ~ 2340758 (-)
CI01000019_01503557_01515831 NA other downstream 2026781 1503466 ~ 1517469 (-)
G107820 NA other downstream 2065477 1478851 ~ 1479141 (-)
G107779 NA other downstream 2120801 1423565 ~ 1423817 (-)
G110029 NA other upstream 314648 3861001 ~ 4015766 (-)
CI01000019_05571685_05572535 LAMTOR4 other upstream 2024587 5570940 ~ 5572535 (-)

Expression



Co-expression Network