CI01000024_04775678_04783105



Basic Information


Item Value
gene id CI01000024_04775678_04783105
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000024
NCBI id null
chromosome length 8644187
location 4774983 ~ 4783105 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000024_04775678_04783105.mRNA
GTGCGTGAGATGGAGGCGGAGCTTGAAGATGAAAGGAAGCAGAGAGCTCTTGCTGTAGCTGCCAAGAAGAAACTGGAACTGGACCTCAAAGATGTGGAAGCTCAGATCGAGGCCGCAAACAAGGCCCGTGATGAAGCCATTAAACAGCTACGCAAACTGCAGGCCCAGATGAAGGACTATCAGAGAGAGCTGGAGGAGGCGCGCACATCTCGTGATGAGATCTTTGCTCAGTCTAAAGAGAATGAGAAGAAACTCAAGAGTCTCGAGGCTGAGATTCTGCAGCTGCAAGAGAGAAGGCTGGAGGCTCGTATCGCCCAGCTGGAAGAAGAGCTTGAGGAAGAACAAAGCAACATGGAGCTTCTCAACGACCGCTTCCGCAAGACCACTATGCAGGTGGATACCTTGAACACAGAGCTGGCAGGAGAGCGCAGTGCCGCCCAGAAGAGCGAGAACGCCCGTCAGCAGCTGGAGCGGCAAAACAAAGATTTGAAGGCCAAACTGCAAGAACTGGAAGGATCCATCAAATCAAAGTTCAAGGCCTCTATCGCTGCCCTGGAGGCCAAGATTATCCAGCTAGAGGAGCAACTTGAACAGGAAGCGAAGGAGAGAGCTGCAGCAAATAAGATTGTGCGTCGCACAGAGAAGAAACTGAAAGAAGTGTTCATGCAAGTGGAGGATGAGCGTCGCCATGCTGACCAGTACAAAGAGCAGATGGAAAAGGCAAACTCCCGCATGAAGCAGCTGAAAAGGCAGCTGGAGGAGGCTGAGGAAGAGGCGACTCGAGCTAACGCCTCACGCAGGAAGCTGCAGAGAGAGCTGGACGATGCCACCGAAGCCAGTGAGGGTCTGAGCCGGGAGGTCAACACACTCAAAAACCGCCTCAGTTTAATAATGAAGCAGCAAATGGTCAGACTGTCAGTGTGGTCAGCTGAGCTGATATTCACTGCAATTTCAGAGACAAAATGGATCCAAAAAAGCTGGATCAACCTTAAAAAAAACGAAGTCCTGCGAGGAGGTCCTGTTAGCTTCTCATCAAGCCGTTCTGGGCGCAGGCAGCTGCAGATGGAGGGAGAATTGTCTGACGATGATGCAGACAGCAAGGCCAGCGACCTGAACGAGAACCAGCCGGCTCAAGCGGAATAGAGCACAGCGCCCTCATGTGTTCATCCTGCCCCACTGCTTCCTCCTCTCTAAAATGACACCTTGCAGCACCTCATTCTTCTCCTTTAGCTACGTGGGGTCAGCGGTACAGAAAGAGGACCAGTGAGCAATGTACATGCACACGCACGCGCACACACACACATTAACACTTCCACATACTCACTCAGACATAAGCTACCCTCAGCCCTACATTTCTATCCCCACCCTACCAAAAGAGCATCAACTCTGCCTTGTATTCAATACAAGATGCTTTAAGACACACCAATTAGTGTTTTCCCGCAACTGTAGACTACAAAATACTGCGCTCACGACAGAACACACTAGAAGTACAAGTGCATTTCAAACATCAGAGTTTGCTTTGTGTACATGAATATGCTCATTCATAAGAGCGTTAGTTTAATGATGTAAAACCATCAGCTAGCTAAGCAAATGTGACAGATCGGATCTTAGTTGTACAGTGCAGTTCTCCAGATAAACACGTTCTGCAGATTCTGGGTCGATTTGAGATGCATGTGCTGCTCGTTCGCTACAAGCCAACATTTAAAGAAAAAAAAAAAATGTCCTGTGGCACTGGACCGGATCTGAAACGGACCAGAAAAGAAAAAAACTGTGAAAAAGCTGCTCACTTCAGCATCTCATTACCATTTAAACACATTAAATAGTTAAAACACAATAAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000024_04775678_04783105.mRNA True 1838 mRNA 0.49 8 4774983 4783105

Neighbor


gene id symbol gene type direction distance location
CI01000024_04596928_04606949 NA coding downstream 168034 4596755 ~ 4606949 (-)
CI01000024_04584906_04590559 NA coding downstream 184262 4584454 ~ 4590721 (-)
CI01000024_04565630_04567525 KLF2 coding downstream 207349 4565222 ~ 4567634 (-)
CI01000024_04555804_04556790 NA coding downstream 217835 4555514 ~ 4557148 (-)
CI01000024_04542156_04543940 NFIL3-5 coding downstream 231012 4540433 ~ 4543971 (-)
CI01000024_04849096_04855992 NA coding upstream 65720 4848825 ~ 4856309 (-)
CI01000024_04860251_04882047 ERBB3A coding upstream 76997 4860102 ~ 4882804 (-)
CI01000024_04890922_04892119 NA coding upstream 107671 4890776 ~ 4892154 (-)
CI01000024_04900693_04903891 ARF2B, ARF3A, ARF1L, ARF3, ARF2, ARF1, ARF3.S, ARF5, ARF2A, ARF5.L coding upstream 116745 4899850 ~ 4903966 (-)
CI01000024_04921413_04932000 NA coding upstream 137690 4920795 ~ 4932000 (-)
G124035 NA non-coding downstream 7151 4767230 ~ 4767832 (-)
G124032 NA non-coding downstream 9981 4764718 ~ 4765002 (-)
G123737 NA non-coding downstream 35384 4737303 ~ 4739599 (-)
G123783 NA non-coding downstream 57954 4715864 ~ 4717029 (-)
G123785 NA non-coding downstream 62466 4711861 ~ 4712517 (-)
G124040 NA non-coding upstream 67572 4850677 ~ 4851335 (-)
G123757 NA non-coding upstream 113439 4896544 ~ 4898680 (-)
G124042 NA non-coding upstream 123450 4906555 ~ 4906840 (-)
G124044 NA non-coding upstream 127625 4910730 ~ 4910943 (-)
G123748 NA non-coding upstream 131235 4914340 ~ 4919052 (-)
CI01000024_03938368_03941795 NA other downstream 833059 3938315 ~ 3941924 (-)
G123233 NA other downstream 2219947 2547460 ~ 2555036 (-)
CI01000024_00825386_00837898 NA other downstream 3948132 824968 ~ 838550 (-)
G125457 NA other upstream 2574132 7357237 ~ 7358104 (-)
G125798 NA other upstream 3192562 7975667 ~ 7976047 (-)

Expression



Co-expression Network