CI01000024_04849096_04855992


Basic Information

Item Value
gene id CI01000024_04849096_04855992
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000024
NCBI id null
chromosome length 8644187
location 4848825 ~ 4856309 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000024_04849096_04855992.mRNA
ACAGATAGATAGATAGATAGAGCGTTAGCTGAATGATTAACAACTATCAGCAAAAAAAAAGTTTGTTTTTTTCCCCCCTTTTTTTACTATTGTGTCCTTTTTGGAAAATATCCAAAAGCCTCGGTTGTTTTTTGGCGCCATCGTATATGACGACACCTCTGATGTGGCTGCGTAGTAGGCGTGGCTACGCTGTGCGTGGAGGCCGTGGGCGGAGCGTGACGGTCGGCGAGCCGCTTGTGCCTGTGGTAGCGTGACTGATTTCTGCTGTCCGCTCAACGTATTGACAGAGAGAGAGACGTTTGAGAGCCGGTGCAACGATGTCCGACGACGAACAGCAAGAGCAGACCATCGCCGAGGACTTGGTCGTGACCAAATACAAGATGGGCGGTGACATAGCCAACCAGGCGTTGAGGGTGGTCATCGAGGCAGCTAAACCAGGAATATCAGTTCTCAGCCTCTGTGAGAAAGGAGATGCTTTCATCATGGCAGAGACTGGGAAGATCTTTAAGAAGGAGAAAGACATGAAGAAAGGCATTGCGTTCCCCACCAGTGTGTCAGTCAATAACTGTGTCTGCCACTTCTCTCCCCTGAAGAGCGACCCAGACTACACGCTGAAAGATGGAGATTTGGTCAAAATTGATTTAGGAGTACATGTTGATGGCTTCATCTCCAACGTGGCCCATAGCTTTGTTATCGGAGCTACTAAGGATGCACCTGTGACAGGAAGGAAAGCTGATGTCATCAAAGCAGCACACCTGTGTGCAGAAGCAGCTTTGCGTCTTGTCAAACCAGGCAACCAGGTTAATACATACTTCACACAGTTAAAGTGGAAAATAGATAAGGTTGAAACTCTTTAGAACTCTTTTGAAACTCTTTAACTCTGAGACCATTAGCTGCCAGCTCCTCAACACAAGATTGTAGAGAATAGGCAGTATGTCTTATGTTTAAATATAGCAATGGTCTGTTTCTCATGCAATGTCTTTTATCTTCTCCATCCGCCCCATTTACCTTTGAAGAACACTCAAGTAACTGAGGCCTGGAACAAGATTGCCCAGTCATTCAAGTGCAATCCAATTGAGGGTGAGTTATGGCTATTATTTCATTTGGGACAGCTCAACCACAATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000024_04849096_04855992.mRNA True 1128 mRNA 0.46 5 4848825 4856309

Neighbor

gene id symbol gene type direction distance location
CI01000024_04775678_04783105 NA coding downstream 65720 4774983 ~ 4783105 (-)
CI01000024_04596928_04606949 NA coding downstream 241876 4596755 ~ 4606949 (-)
CI01000024_04584906_04590559 NA coding downstream 258104 4584454 ~ 4590721 (-)
CI01000024_04565630_04567525 KLF2 coding downstream 281191 4565222 ~ 4567634 (-)
CI01000024_04555804_04556790 NA coding downstream 291677 4555514 ~ 4557148 (-)
CI01000024_04860251_04882047 ERBB3A coding upstream 3793 4860102 ~ 4882804 (-)
CI01000024_04890922_04892119 NA coding upstream 34467 4890776 ~ 4892154 (-)
CI01000024_04900693_04903891 ARF2B, ARF3A, ARF1L, ARF3, ARF2, ARF1, ARF3.S, ARF5, ARF2A, ARF5.L coding upstream 43541 4899850 ~ 4903966 (-)
CI01000024_04921413_04932000 NA coding upstream 64486 4920795 ~ 4932000 (-)
CI01000024_04934952_04935671 SOX21A coding upstream 78559 4934868 ~ 4935840 (-)
G124035 NA non-coding downstream 80993 4767230 ~ 4767832 (-)
G124032 NA non-coding downstream 83823 4764718 ~ 4765002 (-)
G123737 NA non-coding downstream 109226 4737303 ~ 4739599 (-)
G123783 NA non-coding downstream 131796 4715864 ~ 4717029 (-)
G123785 NA non-coding downstream 136308 4711861 ~ 4712517 (-)
G123757 NA non-coding upstream 40235 4896544 ~ 4898680 (-)
G124042 NA non-coding upstream 50246 4906555 ~ 4906840 (-)
G124044 NA non-coding upstream 54421 4910730 ~ 4910943 (-)
G123748 NA non-coding upstream 58031 4914340 ~ 4919052 (-)
G124099 NA non-coding upstream 258054 5114363 ~ 5114584 (-)
CI01000024_03938368_03941795 NA other downstream 906901 3938315 ~ 3941924 (-)
G123233 NA other downstream 2293789 2547460 ~ 2555036 (-)
CI01000024_00825386_00837898 NA other downstream 4021974 824968 ~ 838550 (-)
G125457 NA other upstream 2500928 7357237 ~ 7358104 (-)
G125798 NA other upstream 3119358 7975667 ~ 7976047 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_031830 pa2g4a coding NC_007117.7 CM002890.2 7533601 ~ 7551140 (+)