CI01000024_04596928_04606949


Basic Information

Item Value
gene id CI01000024_04596928_04606949
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000024
NCBI id null
chromosome length 8644187
location 4596755 ~ 4606949 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000024_04596928_04606949.mRNA
AGGAAGTCCCTCAGAGACCAATGGCTGATGGAAGGACCTCCCGCATCTCCTGACAGTATAGGACCCCGATCGCCCCTCTGGGGCCATAAGGCTCAAGAGATTGAGACTCACATTAACAATGCAGTTTTATATAGCTATAAAGCATGCTGTGATTTCCAGAGTAAATTGCGAGTGACGTCTGAGCAGTTGGCAGAGGAAGAATTCAAACTGAAGAAACTCATTGAAGACGGTTCCAGTCAAACTGGCACAGATGCTCAGACACAACATAAGGAAGAGACTGCGGTGGAGCCAGTGGGAACAGAAGTTGCTGAGACGGCCCCTAATGGACCTATCGTAGAGAATGGAAATGAGGAAAAGAAAGATAATTCTGTGCATGCTGACAATCACGACGTGGAGGAAGCAGAACCACTCACTGATGCTAACACAACAGCTGAAGTTGTTGTGGTGTCAGTTTCTATCAATGGAAATGGGGAAGGAGAAACATCACAAGATACTCCAGGACAGGACGAACCTGCTTCTGCTAACGGCTTCACCAGCCACCCTGCTGAAGGAACAGGTACTGGTGGAATAACTATGACCTTCCTTGGCTTCAAGGAGGCGGAGCCCGGGGATGGAGTTGATGAGGATGATGACTGTGGAGCAATTATCCGAGCAGAAAGAGTCATCATCACAGACGAAGGGGAGGAAATCCCAGAGGAAGATGATGGCATGGCTCAAGAACCTACTACAGATGCTAAAAATGAAGACACATCTGGAAACACAGAAGCAACGGTTGCTGAAGAAGAGAGACAGGATGATCCGGAAGCTTCTGTTGAGCCGAAGCAGGTCGAAGTGATTGAAGATACTCCTGCTGAGGAAATAGTTACGGATGTGGCAGTGGAAGGCGAAGAGCAAACAGAGCAACATCTCCCAGACTCCACTGATACGCAACCACAAACTGTGACAGTAGACAGCCCTGTAGAGGAGGTTCCAGTGTATTCCACAACAGAACCTTCTCCAACAATCCAACCAAAAGTCGAAGCAAACGCAATAGAATCACAAACCCCAAAAGACGAGGAGACCGTGCCCGCCTCGCGCATCTCGCTCAGCCAATTTCAGGAGGTTCCACTGGATGAGTCCAACACCAAGGCTGAAACAGAGAAGCAGCGTGCCGAACAAGAACCTCTGCTGATCTCCAAAGCAGCGGCCCAGCTGGATACCAGCACCCCAAATCGAGCAGAGGACGCAATAGCGCCAAAGCGAAAAACCTGCCAGTGTTGTTCGATCATGTGAACGGTGTGCTGACGTTTGACTGTGACTTTTTATTTTTCTTTCTTTTTCATCTTGCCTGTTACTCTGAATACACAGTTTGTATTTCAAGATGATTTTCAGCTGTTCACTAACTGCTTTGCAGCGCCGTCAAAGCACAAAGTGTTTATTATGAACTGAAGCATACCTTCAAAAAA

Function

NR:

description
Paralemmin-3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000024_04596928_04606949.mRNA True 1445 mRNA 0.48 6 4596755 4606949

Neighbor

gene id symbol gene type direction distance location
CI01000024_04584906_04590559 NA coding downstream 6034 4584454 ~ 4590721 (-)
CI01000024_04565630_04567525 KLF2 coding downstream 29121 4565222 ~ 4567634 (-)
CI01000024_04555804_04556790 NA coding downstream 39607 4555514 ~ 4557148 (-)
CI01000024_04542156_04543940 NFIL3-5 coding downstream 52784 4540433 ~ 4543971 (-)
CI01000024_04457561_04464979 GCDHA coding downstream 131776 4457077 ~ 4464979 (-)
CI01000024_04775678_04783105 NA coding upstream 168034 4774983 ~ 4783105 (-)
CI01000024_04849096_04855992 NA coding upstream 241876 4848825 ~ 4856309 (-)
CI01000024_04860251_04882047 ERBB3A coding upstream 253153 4860102 ~ 4882804 (-)
CI01000024_04890922_04892119 NA coding upstream 283827 4890776 ~ 4892154 (-)
CI01000024_04900693_04903891 ARF2B, ARF3A, ARF1L, ARF3, ARF2, ARF1, ARF3.S, ARF5, ARF2A, ARF5.L coding upstream 292901 4899850 ~ 4903966 (-)
G123788 NA non-coding downstream 17138 4578636 ~ 4579617 (-)
G123770 NA non-coding downstream 18232 4578194 ~ 4578523 (-)
G123946 NA non-coding downstream 20795 4511076 ~ 4575960 (-)
G123940 NA non-coding downstream 95577 4500654 ~ 4501178 (-)
G123937 NA non-coding downstream 147651 4447190 ~ 4449104 (-)
G123996 NA non-coding upstream 55426 4662375 ~ 4662574 (-)
G123998 NA non-coding upstream 57229 4664178 ~ 4664387 (-)
G123999 NA non-coding upstream 57592 4664541 ~ 4665029 (-)
G124000 NA non-coding upstream 58260 4665209 ~ 4665540 (-)
G123785 NA non-coding upstream 104912 4711861 ~ 4712517 (-)
CI01000024_03938368_03941795 NA other downstream 654831 3938315 ~ 3941924 (-)
G123233 NA other downstream 2041719 2547460 ~ 2555036 (-)
CI01000024_00825386_00837898 NA other downstream 3769904 824968 ~ 838550 (-)
G125457 NA other upstream 2750288 7357237 ~ 7358104 (-)
G125798 NA other upstream 3368718 7975667 ~ 7976047 (-)

Expression


Co-expression Network