CI01000026_00750324_00762810


Basic Information

Item Value
gene id CI01000026_00750324_00762810
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 749001 ~ 762810 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000026_00750324_00762810.mRNA
AATTATCCATCCCTGTGCAGCCCGTTAGACACCAAGATCTGGACTGGGATCAGTATTAACACTTGTGTGAGTGTGGAGACTTTGAGGAGCGCTCTAACAAAGCATCAAGAATTTCTCAATGGTGCAATGTTGAACATTACAGGAACTGAGCTAAGGAGGATTGAGAAGTTTACAGTGAATGTGACTATGGATCCTGAAACAGCACACCCAAAACTCCTCTTGTCTGAGGATGACAAACAAGTTGGATATGGAGAAACACGACAGATTGTCCCAGACAATCCATGGAGGTTTGATAAATGTCCCAGTGTCCTGGGGAAGGAGGGATTCTCCTCTGGGAAATTTTATTTTGAGGTGCAGGTAGAAGGGAAAACTGAGTGGGATTTAGGTGTGGCGAGAGAGTCTGTTAACAGGAAGGGAATAATCACTCTGAGTCCAAGGAATGGACTATGGACTCTGTGGTTGAGGAATGGAAGTGAGTACAAGGCCTGTGACTGTCTGTCTGTCTCTCTCTTTCTGAAAGTGAAGCCCCAGAAGGTGGGTGTGTTTGTGGATTATGAGGAGGGTCTGGTCTCCTTTTATGATGTGGAGTCCAGGTCTCATATCTACTCTTTTACTGCCCAGTTATGTGCCAGTGGGCAGTTATCTGAAGAGCTCCAGTGTGCCATCTGTCTGGATGTATACAGTGATCCTATACAGGCCTTCCTCAAGGAATGCTGGGAAAGCAGTCATGATAACAGATGTCCATGCTGTAAAGAAAATTTCAGCAAGAGAGCAGATCTTAGAGATTTTGAGCAGCTATGTTCTCAATCTGAAATCCTGATGTGTCAGAGCTCTTACTGTAAGCCTAAAGTGGAGCCTCATGAGAGAGTCCCAAATTTAAAGCAGGTCATGATGATTGACCTTGTGGAGAATATCAATCCTAAAATAATCCAGAATCATGACAGACCTCTGGAGTTGTTCTGTAGAGATGATCATAGATTTGTGTGTCTGTCCTGTGCTGAGGAAGACCACAAGACTCACAACACTGTTCCTGGTGAAGATGAGAGTGAAATGAAGAAGGCCCAACAGGTGATGATGCACAAGCTTGTGCAGCAGATGATCCAGGACACAATGAAGAAAAATGAAATCCAATGCTTTAAAATGAAAATGAGCAAAATGAGCACTGCAGAAGACAGTAGAGAGAAAGCAGCCATGATGCTCAACACTGCTGCCACAACGATCTCTTCCTTAGAAACTATGACTAAGGAGAAAGGCGTGAGACTGGGCTGAGGAGTGGCATCGTTCTCTTTCACATCATGATTACTACGATACAGAAAAGATATATTACTTATAGATAGACTCAGCTGAAAAAGAAATACACTGTATTTTGAATTCTGTAACTGCTGACATATTGTGATGCAGGTAAAACACATTAGAAAATCATTTCAGATTTGAAAAAA

Function

NR:

description
hypothetical protein cypCar_00049637, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000026_00750324_00762810.mRNA False 1439 mRNA 0.43 7 750154 762810

Neighbor

gene id symbol gene type direction distance location
CI01000026_00720139_00726461 MMP14A, MMP14 coding downstream 23693 719120 ~ 726461 (-)
CI01000026_00704809_00709524 AJUBA coding downstream 40630 704278 ~ 709524 (-)
CI01000026_00660711_00663647 DHRS4 coding downstream 86227 660576 ~ 663927 (-)
CI01000026_00649560_00650856 CIDEB coding downstream 99298 648536 ~ 650856 (-)
CI01000026_00640645_00641903 NA coding downstream 108159 640259 ~ 641995 (-)
CI01000026_00767991_00775879 GMPR2, GMPR2.S coding upstream 5181 767991 ~ 775879 (-)
CI01000026_00781130_00793571 SLC7A8A, MGC53111, SLC7A8, SLC7A8.L coding upstream 17089 779899 ~ 793571 (-)
CI01000026_00898521_00902621 NA coding upstream 135409 898219 ~ 902692 (-)
CI01000026_00904115_00907709 NA coding upstream 141114 903924 ~ 907754 (-)
CI01000026_00909358_00915047 PTGR1 coding upstream 146380 909190 ~ 915047 (-)
G127096 NA non-coding downstream 2857 746944 ~ 747297 (-)
G127095 NA non-coding downstream 3322 746615 ~ 746832 (-)
G127030 NA non-coding downstream 9360 739752 ~ 740794 (-)
G127090 NA non-coding downstream 28199 721650 ~ 721955 (-)
G127011 NA non-coding downstream 143658 606290 ~ 606496 (-)
G127104 NA non-coding upstream 1937 764747 ~ 764980 (-)
G127134 NA non-coding upstream 105932 868742 ~ 870191 (-)
G127143 NA non-coding upstream 166185 928995 ~ 929298 (-)
G127144 NA non-coding upstream 167584 930394 ~ 930719 (-)
G127152 NA non-coding upstream 179951 942761 ~ 946830 (-)
CI01000026_00986386_01002180 NA other upstream 237037 986182 ~ 1002180 (-)
G127418 NA other upstream 972967 1735777 ~ 1736220 (-)
CI01000026_03439507_03490314 PDE3B other upstream 2617975 3438795 ~ 3490503 (-)
G129476 NA other upstream 2907764 3670574 ~ 3670884 (-)
G129658 NA other upstream 3604486 4367296 ~ 4373069 (-)
G127101 NA non-coding upstream 3180 754814 ~ 755142 (-)
G127102 NA non-coding upstream 7987 759621 ~ 759851 (-)

Expression


Co-expression Network