CI01000026_07411794_07431870 (UACAB, UACA)


Basic Information

Item Value
gene id CI01000026_07411794_07431870
gene name UACAB, UACA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 7411605 ~ 7431870 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000026_07411794_07431870.mRNA
AACACAGACTGGAATAAGTATGATGACAGGCTGATGAAGGCAGTGGAGAGGAGGGAGGTGGACAAGGTCGCAGCAGTGCTTGGCAAAAAGGGCATCATCCCCACCAAACTCGATGTAGAGGGCCGCTCTGCATGCTTGACCAGGCGCAGAAAAGAAGAACCCAGAACAGCCTGGGCCTCCTGGGCTGGAAGTGGGTCTTCACTCCCAGTCCAGAGAGCTTTAGATGATGCCCCTTTATTTTGGGATGAATGCAAGAAAAGTATTTTAGTTCTAATAATAAGACTTTTTTTCATCTCAAATTGCCACCCATCCATCTCTCCATGGGTGGTTGTTTGGGACAGTGTGTGGAGTTATCCACAACTTCACATGTCGAGCTTCAGGTTCCATCTGGCTGCCTCTAGGGGACATCTCGACTGCCTGAATCTCATTCTTAATCATGGTGTGGATATCACAGCCACGGATGCCACAGGAAAAAATGCCTTACACCTGGCAGCCAGAAATGCCCAGTCACTGTGCGTACAGAAACTACTCCAGCACAATTGCCCAGTGGGAAATGTGGACCTGCAGGGAAGAACAGCCTTGCATGATGCTGTTATGGCCGGCTGCTCCTCCAGCGTGAAGCTGCTCTGTGACAGCGGGGCATCAGTTAATGCCAGCGACTTTGATGGTCGGACCCCATTGGTGCTTGCCACTCAAATGTGTCATCCACACATCTGTCAGCTGCTGTTGGAAAGAGGAAGTGACATCACAGTCAGAGACAAACAGAATAAAACAGCGTTGATTTTGGGCTGTGAATACGCGTGTAAGGATGCTGTGGACGTTTTGTTGAAACATGGCGCTGACGTCACTGCTGTGGATGGTTTTGGACATGACAGTTATCACTATGCACGACTCAGCAAAAACCAGGAGCTTGTCTCTCTTGTCAAGAGTTACCTGGACAGTGCCACAAAAGCAAAAGAAGCTGCCAAGATGGAACAGAAAAAGAGACAGTCTGTGGAGATGGCCTCTGAAAACTCTAACCATGAAAAGATCATACAGGACCTGGAGAAAAAGAATGAGAGCCAACAGGAGTCTCTAAAGAAGTTCCACCAGGAACAGAGGACGCTGCTTGATAAAGTTAACATGCTTCAGCAGCAACTCAGCCAGGAAAAGTCAACAGTGGAGGACATTCACAAGGAGAGAGAACAGCTGAAGCTTTTACTTTCTGCCAAAGAGAAGGACGAAGGAGTCCGGGCCATAGAGACTGTGAGAGTCCAGCAGCGGAGCCATTTGGAAGATTACCCTGGCCAGTCTGTGATCAAAGGAAAAGACAATGTACTAGTTCGACAGTCACACAGCTTGGACTCTGCTCAGATCTTGCAGCCTACAGGACCATCTCGATCTGTGTCTCGACCCTTGGAGCTGTCTCGGCCGGTGACTGGTGTTCCTGAGACACTTCGTCAAGAGCTTGAATGTGTCCGCAGACAGCAAGAGGCTGCACAAGAGGAGGTGGGCCACCTCAAAAAGGCTCTAGCAAGCAAGTCCCAGGAGTGCGAGGAGCTGACCAAGAAGTGTGAGACCATCAAACGCGAGTCAGACCAGCAGGTACGTGAGCTGGAGGAAGCCATGGGAGATGTGCAGAAGCGAATGATGGAGTCTGAGTCAAAGGTGAAACAACTTCAGGCTCATGTGGTGGCGGTAAAGGACCATCTCAATAACCAAGTTGTTGATGACCTTAAAACACAGCTGAATGATATGAAGGCAAAGTATGAGGGAGCTTCTGCTGAAGTTGGACGGGTCAGGAACCATTTGAAACAGAGTGAGAAAGCATTGGAGGAGTATAAAAAAAGTGAAGGACTTCTGGCTGTGGAGGTTGAGAGGCTTACTGCAGAGCTGAGCGCAATGCAAGAGGACCATAAAGACATGGAAGAAATGCTCTTAAACATGGAAGGTCAAGTGAAGACTGCAGAGGTCAGGTTGACGTCAATGGTTCCAGGAGAAAAGTTTGACAACATGAAGAACCTTCTCACCAATGCTGTGGATGAGAAGGAGCTACAGTTGGCTGAGTTAAGGGAAGATTATGACCGTGTGCTGGAGGAAGTGGCAGAGCTCCACCGTGCGATGGACGACCGACAAACTGTCCCCCTGCAAGAGCACGAACGAGTCCGGGCTGCTCTGGAGGAGCAAACCTCAAACCTGAAGAAGAAACTTGCTGATGTCACTGCAAAGTGTCAGTCATTAATATGTGAAGTGGAGGAGGGTGAGGATGAGAGAGAACTGCTCAGAGAGGAGCTGCAGGAACTCAGCAACAATCTGAAAACCAAGTTTGTGAGTTTAGAAAACCACGAGGAGGTGAAGAGGTCTATGGGACTTGCTGTGGAGGAGTTGAGGGTTAGGTTGGCAGAGGAGACGGAGAAGAGAAAACATGCTGAGGAGCAGATACAGAGGCTGCAGGAGGAGAAGATCTCTCTCTGTGAGAACGTTACCAACCTGAAGAGCACATACATCCCCTGTGAACGTTATGAGAGTGAGATGTCTGCACTCACAGAACGCAACACAGAAATGGAAGGAGATCTTAACAGCCTTCGGGATAAATACCAGGAGAAAGTCAATGAACTTGAAATTTTGGCAGCTGAAAAAGCAACACTGAAGAAGAGCTTTGACACTGAGTTTGTCACAAAGAAGGAGTATGAGAGAGTGCGGATGGAGTTAGATGAGGCTTTGGAGAAAGCGAAGATTGAAATCGCAAAGTTGGAGGATGATTGTAGAGTTCGGGACGAGGAGTTACAGAAGGCGAAAGAAGGAAATGCTATGTTGAAAGAAGAGTTTAAGAATGTGCAGGCCAAGTTAGCAAATGATTATATCAGCCTTGTGGAACATGAGGTATTCAAAAGTACAATGAGCAAAGCTTTATCAGAAGCAGAGGGACGAGCTAGAGATGCCAACTCAAAGTACCAGTGTGCTCAAGAGAGTGCGTCAAAGCTACACGAGGAAATCGAAGCACAGAAGAAAGAGTTGGATACTATTCAAGAGGCATTGCAGTTGAAGTTTGTGCCATTGACTGCTATGGAGGAAAAAGAGATTTATTTCAACACCACTTTGAAGGACTTGGCAGATAAACTTGCTGAAGTGAAGGAGATCTACAATATTGAAAAGACCAAAGGGGAAAGCCAAAGACTAGAGAATGAAAAATTGAAAGAAGACATGGCGTCTCTGCAGCAGAAACTTCAGACGGGGCTTGTGTCCAGCGAGAAGTACAAAGAAGTGGAGGACCGCTGCAAGGGCCAGGTGGAGGAGCTGAGTCTGAAGTTGGTGGAGCTAGAGCAGCAATATAAAGAGGTTACGATCCAGCGGGCCGAACTAGAGGAGCAAAACGCATTCTGCAACTCTGAGATCCAGAGTCTCCAGAAGAAACTGAACAGTGAGTATATCCATCTAGAGCAGTTTGAGGCCATGCAGAGCTCTCTGAGTGGGAGCCTGCAGGAAGCGCAGAAGGAGTGCAAGTGCTTACATGAAGCTCATAAACTGGAAGTCCAGCGTGTTCAAGAACTAGAAAAACAACTCCAGAGTCAGAGCTGTGATGAGACCCAGCATAGCCAAGTTAAAGAGGCTCTGGAACGTGAGGTCAACGAGCTTCGCTTGGCACTGCGGGAGGAGGAAGAAACCAGCGCGCAGAGGGCTGAGGACGTAGCCACTCTGCAGACTGAGCTCCTCAGAGCCACTCACGCTCTCGATGACCTCCGCAGCTATGAAGAACAGGTGAATGAGCTCAGATCTGAAAAGCACAAGCTGGAGGAGAAGGTGCGTGAACTTGGCGATCGGCTGTCAGGACTGGATGAGCAATATGAGGATCTGCACAGGGAAACAACCCAGGCCAGGGAGGGTGAAAAGAGGGCTAGAGCAGAAACTGAGGCCCTGCAGATAAAGAGCGCCTCCATTGAGAAGGAGATCAGAGATCTGAAAGAGAGATATGAGGAATCACTCAGCACCATTGGAGAACTACAGAAGAGGATTCAAGCATCCTCAGAGCAGACTGAGCTTAAAGACAAAAGGATCACAGAACTGTTGGCAGATGTTGAAAGGCTGAAACAGGCTCTGAATGGCTTATCCCAGCTGGCTTATGCTGGCAACACGCCCAACAAGAGACAGACTCAACACATTGACACACTCCAAGCCCAGGTCAAGAGCCTTCAGCAGCAGCTGGCTGTGAGTAGCTCTGTTCGTATGCAGATACCGGTGGATTTGTTTATAATTGCCTACAAATATGACATGCCATCAACCTTGGACTAAAAAATACACCCACTTACTGACTGACTTGCATTCATAATAGATTCTAGAGCCTTCTATTCTATGGCGTGGGGGGGTGGGGGTGCAAGAATGCACTGAGGGACCGATTTCTTTCTCCCTCAGGTTATTTCAGCTGTAACAGGATAATATTATTAAGGAGTCTTCCAAGATTTGGTGTTTTTCTGAATTAAA

Function

symbol description
uacab Predicted to be involved in negative regulation of NIK/NF-kappaB signaling and positive regulation of cysteine-type endopeptidase activity involved in apoptotic process. Predicted to act upstream of or within apoptotic signaling pathway and regulation of NIK/NF-kappaB signaling. Predicted to be active in cytosol and nucleus. Is expressed in several structures, including gut; hindbrain neural plate; midbrain neural keel; musculature system; and nervous system. Orthologous to human UACA (uveal autoantigen with coiled-coil domains and ankyrin repeats).
uaca Predicted to be involved in negative regulation of NIK/NF-kappaB signaling and positive regulation of cysteine-type endopeptidase activity involved in apoptotic process. Predicted to act upstream of or within several processes, including intrinsic apoptotic signaling pathway; negative regulation of inflammatory response; and positive regulation of protein import into nucleus. Located in cytosol and nucleoplasm.

GO:

id name namespace
GO:0097190 apoptotic signaling pathway biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000026_07411794_07431870.mRNA True 4458 mRNA 0.48 19 7411605 7431870

Neighbor

gene id symbol gene type direction distance location
CI01000026_07296064_07324974 TLE3, TLE3B coding downstream 86631 7295603 ~ 7324974 (-)
CI01000026_07095211_07103045 ANP32A coding downstream 308560 7094408 ~ 7103045 (-)
CI01000026_07027681_07028117 NA coding downstream 383005 7027297 ~ 7028600 (-)
CI01000026_06979917_07017829 ITGA11A, ITGA11 coding downstream 393776 6979917 ~ 7017829 (-)
CI01000026_06951574_06956778 MNS1 coding downstream 454792 6951410 ~ 6956813 (-)
CI01000026_07465798_07466811 RXFP3.3A1 coding upstream 33557 7465427 ~ 7466994 (-)
CI01000026_07470871_07494876 PIAS1A coding upstream 38865 7470735 ~ 7494876 (-)
CI01000026_07519204_07523946 SKOR1A, SKOR1 coding upstream 87132 7519002 ~ 7523946 (-)
CI01000026_07537510_07596897 MAP2K5 coding upstream 105290 7537160 ~ 7597348 (-)
CI01000026_07625890_07661161 SMAD3 coding upstream 192834 7624704 ~ 7661780 (-)
G131447 NA non-coding downstream 181478 7229880 ~ 7230127 (-)
G131444 NA non-coding downstream 186737 7224428 ~ 7224868 (-)
G131442 NA non-coding downstream 189016 7222350 ~ 7222589 (-)
G131439 NA non-coding downstream 193894 7217453 ~ 7217711 (-)
G131424 NA non-coding downstream 223872 7182757 ~ 7187733 (-)
G131516 NA non-coding upstream 97128 7528998 ~ 7530996 (-)
G131568 NA non-coding upstream 280653 7712523 ~ 7712740 (-)
G131571 NA non-coding upstream 283079 7714949 ~ 7715175 (-)
G131574 NA non-coding upstream 293626 7725496 ~ 7726088 (-)
CI01000026_07876455_07881355 TEX9 non-coding upstream 450039 7876340 ~ 7882737 (-)
G130256 NA other downstream 1094451 6275511 ~ 6317154 (-)
G129750 NA other downstream 2592323 4785885 ~ 4820249 (-)
G129658 NA other downstream 3038536 4367296 ~ 4373069 (-)
G129476 NA other downstream 3740721 3670574 ~ 3670884 (-)
CI01000026_03439507_03490314 PDE3B other downstream 3921102 3438795 ~ 3490503 (-)
G131742 NA other upstream 874906 8306776 ~ 8307707 (-)
G132575 NA other upstream 1955281 9387151 ~ 9387716 (-)
G132721 NA other upstream 2118160 9550030 ~ 9550644 (-)
CI01000026_10347872_10351783 CEBPA other upstream 2916323 10347746 ~ 10351783 (-)
CI01000026_10788054_10788652 CD59 other upstream 3355469 10787339 ~ 10789709 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location