CI01000026_10762484_10769015


Basic Information

Item Value
gene id CI01000026_10762484_10769015
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 10761973 ~ 10769262 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000026_10762484_10769015.mRNA
TTATAAATAGAGGAAATGGGCTGCGTTTTTTAGCAATTAAGAATAAAGTGACGTATCGGGTATTACTTGCCCCAGATACTACACGAAAGTATGGCCAACCAATAATAACAGTTGTCACCTGCCGTTTTAGCAGTTTTCTACATAATCATGATTAATCACCTGGTTTTGTTTTTGCTTTCTGCAGCCCCTCACTTACCCACAGGTGTGTGGGCGCACGCGAGAGAATGTAAATTGATTTCATAGGTAGTTGTAGGCCAGTTGTAGGCTGAATGCTGTATTTTTTGTAAATTATTTAATAAGATCAGTGAAATTTTGTACATCGGCGGTACAAAAACTGAAATCAATTTTTTAGGTCTATTGTTCGTGAGGAAAATTCCTTATTTTAGGCTTAGATTGTAATGCTAATTTTATTTTGGGTTTTTCATTTAGCGAAATCTGGCAACACTGTTTTGCGCGTATCACCAGCGGACCTTCTCTGTCAAGGAGGGGGACGTTTCGGATTGTCTTGGTAATGGCGGACACATGTGGCCAAGTCCTCCTTGGGTCTGGACTAACAGTCCTTTCCCACCCTCTTATGTACATCAAGGTTTTAGTTCAGGTTGGACATGAACCTCTTCCTCCTACTCTAGGCAGGAATATGTTTGGTCGACAAGTGTACCAGCTTCCAGGGCTCTTTGCATATGCCAAACACATCATCAAAACTGATGGGAAATCAGGCCTGTTTAAGGGTCTCACTCCGAGGCTTTGTGCTGGGACCATTGGCACCATTGTCCACAGTAAAGTCTTGCAGAAGTGCCAGGAGGAAAAAATTGAGTCTGTTGCACAATTGTGTGTGAGTGGCGTCTTTGACTCCATAGTTACCATCTACAGGGAAGAGGGAATCCTGGGTTTTTTTGCTGGCATCATTCCTCGTTTATTGGGTGATGCTCTGTCCCTGTGGATCTGCAACATGCTTGCTCACTTCATAAACACATACGCTATAGACGACTCGACGAGTCACACAGGAGAGATTAAGAACTGCTCTCAAGCTGTGACTGGGTTTTTTGCAAGTATGCTGACATATCCATTTGTATTGGTGTCCAACCTGATGGCAGTAAATAACTGTGGGCTGGCTGGAGGTCTGCCACCTTATGCTGCCATTTATCCCAACTGGCTCCACTGCTGGGGTCACTTGAGCCGAGAGGGCAACATGAGCAGAGGCAACAGTCTGTTCTTCAGAAAGTTGCCTGCAGGGAAGATGTACGCCATTGAGCAGAAGAGATTTTTTTGAATGGGAAGCTATCGGCATAGTCTATAATTATGATAATATAATTGAGCTGGCCCACAAAGTTGGACTCCTAATCCTTCGTATGCACTTGTTTAAGATGACAAACTTTTTTTGATCAGTCTGCATCAGCCTCCAGGATTATTACTATTAATTGATCAGTACCTTTTCACTACATTGTTATTTGCTTTGATTTGAAATCATGAAGAGCTTTATTTTAATACCCAGGGATTTGTATACATAACCAAGTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000026_10762484_10769015.mRNA True 1517 mRNA 0.42 11 10761973 10769262

Neighbor

gene id symbol gene type direction distance location
CI01000026_10688269_10691344 NDUFS3 coding upstream 70549 10686928 ~ 10691424 (+)
CI01000026_10683580_10685297 PTPMT1 coding upstream 76505 10682843 ~ 10685468 (+)
CI01000026_10670565_10671520 NA coding upstream 90251 10669655 ~ 10671722 (+)
CI01000026_10655730_10656230 NA coding upstream 105238 10655197 ~ 10656735 (+)
CI01000026_10651216_10652913 NA coding upstream 108219 10649543 ~ 10653754 (+)
CI01000026_10770581_10774331 PSMC3.S, PSMC3, NTHL1.S, PRS6A coding downstream 629 10769891 ~ 10774331 (+)
CI01000026_10801692_10816684 SYT13 coding downstream 32430 10801692 ~ 10816801 (+)
CI01000026_10827685_10831049 NA coding downstream 57167 10826429 ~ 10831124 (+)
CI01000026_10831971_10837028 F2 coding downstream 62709 10831971 ~ 10837065 (+)
CI01000026_10841434_10850234 ARHGAP1 coding downstream 72172 10841434 ~ 10850244 (+)
G133383 NA non-coding upstream 133897 10552960 ~ 10628076 (+)
G133373 NA non-coding upstream 246325 10515420 ~ 10515648 (+)
G133344 NA non-coding upstream 374729 10387042 ~ 10387244 (+)
G133339 NA non-coding upstream 380215 10381554 ~ 10381758 (+)
G133338 NA non-coding upstream 380424 10381254 ~ 10381549 (+)
G133406 NA non-coding downstream 15530 10784792 ~ 10785562 (+)
G133420 NA non-coding downstream 116791 10886053 ~ 10895159 (+)
G133426 NA non-coding downstream 138213 10907475 ~ 10907675 (+)
G133442 NA non-coding downstream 349449 11118711 ~ 11119022 (+)
G133443 NA non-coding downstream 350386 11119648 ~ 11119877 (+)
G133192 NA other upstream 600012 10159819 ~ 10161961 (+)
G132667 NA other upstream 1192813 9568739 ~ 9569160 (+)
G131077 NA other upstream 2255186 8501408 ~ 8506787 (+)
CI01000026_08297901_08307596 CTRB1 other upstream 2462559 8297857 ~ 8307629 (+)
G130967 NA other upstream 2572900 8188374 ~ 8189073 (+)
CI01000026_11075931_11078249 MDK, MDKA other downstream 301506 11075784 ~ 11079080 (+)
CI01000026_11241496_11246081 NA other downstream 475671 11241496 ~ 11246204 (+)
G133542 NA other downstream 706855 11476117 ~ 11477544 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location