CI01000026_10670565_10671520


Basic Information

Item Value
gene id CI01000026_10670565_10671520
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 10669655 ~ 10671722 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000026_10670565_10671520.mRNA
ATATAAAAACAATATGTTTACTACAGGATTGTGTAGTAAACATGAACTAGCATCCCTCACTGCAGGCTTCTAATGGGCATTGACACTCATCTCCTTATAACTGAAAATACTGCCTGACATTTACAATCACTGGCCTTTCAGCTCAGAATAAGTTGTAAACAAACCACTAAATCACTCATTAGATTTTACAAACCACCCTAATTAATGAAATTAAACAGTCCCTGAACTTAATAAAAATATATTCCACCTTTAATACAGTCAACATCAAATCAAAGGAGAACTTAAGATATTAGAGTGAAACCCAAATCAAGTTACGCCAAGCTGAACAGTAAAGTCTGTACTCACACTGGGTTGGAACTCAAACTGCAATGGTCCACCATCATCTCTGGTAGAAAATCCAGCTTAAAGGAAGCCATTTTCTTCAGCACTTCACCAATTAGTAAGTCTCAAATGAACGCTGACAGAATCCACAAAAACAGCAGACTTGTTCACACTTAAACACTAAAACAGCCACAGCAACTATCCGTCAAGTACAATGTCTCTCAAGGTTCAGAAGTCGTAAGAAGTGACATGGGAACAGCTGGGAGAGAAAGGGAAGCGTACACCTCATGGAGGCTGATCAGAACCCACAAAACTCAAATCGACATGGAGCAAAGAGAGACAACGATGAGGCTCGGCACTGTGCTGGATGACAAACACAGGCCGTAGCTCTGGTCACTGGGCTGGGACTGAGGATTAGGACAGGCCCGACAGGCAACTAAAAGCTGCACCCCTGCTCCCACAAAAGAAAGTGCTGATGGAGGGGGACTTTTTTGTGAGTTTTTCTCTTAGCAAAGCAGAACGGAGTGCAGTGTCAGATAAATAAAGTGTCAGATTGATGCTGATAAGCGTGAGTGAGCGGCAGGAATGAATGGGGACAGGCAGCTCTCTGGTAATCCCTGAGCTGAAGAGCCCCCAGGACACAATCGTGTTCCGGCAACGGGCCACGAATGGTGCACTGTTCCAGCATGGAGGGGTATGCTTACTATTTAGAAAAAGAAGCAATGACAAAGTAAGAGCAAGTTATTTTTTCCTTCTCATTTCAGCTTCAAAGAGAAGCTGCTTGAAAGACTCGTTTCCCACTGAGGGAAAACCTGTAGATGGAGGGTATCCTCACACCCCTGGGGTAAAAGGATGTGGAGTGTATGTGTTCTTACCCGCCAAGGGCAGGTACTTCCACAGCAGGAAGGGAAAGCTCGCATTGAGGTTGCCCGATCTGCGCTGTGGTCAGGTAGAGGGCTTCAGCGTCGATGCTATCCATCCAGTGACTTTGTTAAATGCTACAGAAACACACCAAACATTACAGGACACACACATCAGACACACATACACAGGTAAACACAAACTGGAAGGGAAAAAGAAAGAACAAGAGAGACGTCTTCTGACAGAATAGACAGCATGCAAACCTCATGTCACAAAAACTGCATGCACACAGAAAACACATATGTAGGAGAGTGAGAAGGCACTTCCTGGATGATCTGTACATAATCATGTAAATGACAGACTATAATCTGAGAGGAAGCTGTTCTCACTTTCATTGGAGGTAATCAGTTTGTAGAAGCTCAAACGTAAAGGTTTTTCACATTACAAAGGGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000026_10670565_10671520.mRNA True 1634 mRNA 0.44 2 10669655 10671722

Neighbor

gene id symbol gene type direction distance location
CI01000026_10655730_10656230 NA coding upstream 12920 10655197 ~ 10656735 (+)
CI01000026_10651216_10652913 NA coding upstream 15901 10649543 ~ 10653754 (+)
CI01000026_10640494_10646504 BAT1, SLC7A9 coding upstream 22815 10640494 ~ 10646840 (+)
CI01000026_10634025_10634327 NA coding upstream 34130 10633454 ~ 10635525 (+)
CI01000026_10547566_10588420 CEP89 coding upstream 80584 10547271 ~ 10589071 (+)
CI01000026_10683580_10685297 PTPMT1 coding downstream 11121 10682843 ~ 10685468 (+)
CI01000026_10688269_10691344 NDUFS3 coding downstream 15206 10686928 ~ 10691424 (+)
CI01000026_10762484_10769015 NA coding downstream 90251 10761973 ~ 10769262 (+)
CI01000026_10770581_10774331 PSMC3.S, PSMC3, NTHL1.S, PRS6A coding downstream 98169 10769891 ~ 10774331 (+)
CI01000026_10801692_10816684 SYT13 coding downstream 129970 10801692 ~ 10816801 (+)
G133383 NA non-coding upstream 41579 10552960 ~ 10628076 (+)
G133373 NA non-coding upstream 154007 10515420 ~ 10515648 (+)
G133344 NA non-coding upstream 282411 10387042 ~ 10387244 (+)
G133339 NA non-coding upstream 287897 10381554 ~ 10381758 (+)
G133338 NA non-coding upstream 288106 10381254 ~ 10381549 (+)
G133406 NA non-coding downstream 113070 10784792 ~ 10785562 (+)
G133420 NA non-coding downstream 214331 10886053 ~ 10895159 (+)
G133426 NA non-coding downstream 235753 10907475 ~ 10907675 (+)
G133442 NA non-coding downstream 446989 11118711 ~ 11119022 (+)
G133443 NA non-coding downstream 447926 11119648 ~ 11119877 (+)
G133192 NA other upstream 507694 10159819 ~ 10161961 (+)
G132667 NA other upstream 1100495 9568739 ~ 9569160 (+)
G131077 NA other upstream 2162868 8501408 ~ 8506787 (+)
CI01000026_08297901_08307596 CTRB1 other upstream 2370241 8297857 ~ 8307629 (+)
G130967 NA other upstream 2480582 8188374 ~ 8189073 (+)
CI01000026_11075931_11078249 MDK, MDKA other downstream 399046 11075784 ~ 11079080 (+)
CI01000026_11241496_11246081 NA other downstream 573211 11241496 ~ 11246204 (+)
G133542 NA other downstream 804395 11476117 ~ 11477544 (+)

Expression


Co-expression Network