G128525


Basic Information

Item Value
gene id G128525
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 5501918 ~ 5502131 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU146027
GGCGTCTGTTAGCCCCTCCCCCTCCGCTAAGTAATTAAAGCTGTGACAGTTGAGTATCCAACATTCCTCACTTTGTTTATTCGGTTAATTAAGTGCATCATCCGGGTATTTACAGTGCACTTTTTCTTTTTGGAATTTTCAGTGTGAACACACTACTCACTATTTATACTAAAAGTATGCGAATTGGGACGTACTTCGAGTTATTTTGAATTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU146027 True 214 lncRNA 0.39 1 5501918 5502131

Neighbor

gene id symbol gene type direction distance location
CI01000026_05468694_05469437 NA coding upstream 32398 5468694 ~ 5469520 (+)
CI01000026_05437276_05463050 APBA2B, APBA2 coding upstream 38183 5437033 ~ 5463735 (+)
CI01000026_05374510_05376059 MCEE coding upstream 125730 5374324 ~ 5377229 (+)
CI01000026_05343830_05367424 MTMR10 coding upstream 134312 5343830 ~ 5367606 (+)
CI01000026_05271007_05273550 NA coding upstream 228252 5270689 ~ 5273666 (+)
CI01000026_05560160_05585916 NA coding downstream 57730 5559861 ~ 5586104 (+)
CI01000026_05592701_05627231 TJP1A, TJP1 coding downstream 90570 5592701 ~ 5627930 (+)
CI01000026_05633305_05636501 FAM189A1 coding downstream 131174 5633305 ~ 5636938 (+)
CI01000026_05742174_05769229 FAM189A1 coding downstream 240043 5742174 ~ 5769370 (+)
CI01000026_05771496_05786357 CASC4 coding downstream 269365 5771496 ~ 5786357 (+)
G128522 NA non-coding upstream 5626 5496009 ~ 5496292 (+)
G128521 NA non-coding upstream 7975 5493606 ~ 5493943 (+)
G128520 NA non-coding upstream 8929 5492664 ~ 5492989 (+)
G128514 NA non-coding upstream 22590 5479120 ~ 5479328 (+)
G128560 NA non-coding downstream 366125 5868256 ~ 5868582 (+)
G128561 NA non-coding downstream 366806 5868937 ~ 5869164 (+)
G128562 NA non-coding downstream 371352 5873483 ~ 5873730 (+)
G128563 NA non-coding downstream 379962 5882093 ~ 5882325 (+)
G128564 NA non-coding downstream 380449 5882580 ~ 5882878 (+)
CI01000026_04556074_04556964 FOXB1B, FOXB1, FOXB1A other upstream 945601 4555776 ~ 4557613 (+)
G128137 NA other upstream 1070717 4430562 ~ 4431201 (+)
CI01000026_04327206_04331151 DOK4, DOK5 other upstream 1169833 4327206 ~ 4332085 (+)
G127979 NA other upstream 1738932 3752551 ~ 3762986 (+)
CI01000026_02659356_02660297 NA other upstream 2841089 2658605 ~ 2660829 (+)
G128585 NA other downstream 447682 5949813 ~ 5950122 (+)
G128601 NA other downstream 481748 5983879 ~ 5991761 (+)
G128757 NA other downstream 824065 6326196 ~ 6326785 (+)
G130552 NA other downstream 1592922 7095053 ~ 7096652 (+)
G130967 NA other downstream 2686243 8188374 ~ 8189073 (+)

Expression


Co-expression Network