G128561


Basic Information

Item Value
gene id G128561
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 5868937 ~ 5869164 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU146064
TGTGTCGAAATCAGGCACATATAAATGTCAGGAAACACGATTCCTGGCTGCATGCCAATATCCATGGATTAGGTTTCTTTGACATGTCATAAGGAACACTTTCGAGCCCAACCTTTAGTGTAATCGTTTGTTTTACTCGCGTTTTTGCAGTTTCTCCTATTAAATCCAGTCATGCAGCAGGTTCTTTTGCCACTCAGTCCAATAATATCACTGGAATGAAGGTTTATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU146064 True 228 lncRNA 0.40 1 5868937 5869164

Neighbor

gene id symbol gene type direction distance location
CI01000026_05828041_05831860 NA coding upstream 36928 5828041 ~ 5832009 (+)
CI01000026_05820062_05827011 NA coding upstream 41512 5820062 ~ 5827425 (+)
CI01000026_05809690_05817205 NA coding upstream 51464 5809690 ~ 5817473 (+)
CI01000026_05793556_05805041 CTDSPL2B coding upstream 63812 5793556 ~ 5805125 (+)
CI01000026_05771496_05786357 CASC4 coding upstream 82580 5771496 ~ 5786357 (+)
CI01000026_06109467_06140429 MYBPC3 coding downstream 240303 6109467 ~ 6141599 (+)
CI01000026_06174460_06187224 NA coding downstream 304725 6173889 ~ 6187476 (+)
CI01000026_06234663_06316874 METTL15 coding downstream 365499 6234663 ~ 6316874 (+)
CI01000026_06332081_06337355 NA coding downstream 462575 6331739 ~ 6337396 (+)
CI01000026_06385815_06391975 NA coding downstream 516651 6385815 ~ 6392502 (+)
G128560 NA non-coding upstream 355 5868256 ~ 5868582 (+)
G128525 NA non-coding upstream 366806 5501918 ~ 5502131 (+)
G128522 NA non-coding upstream 372645 5496009 ~ 5496292 (+)
G128521 NA non-coding upstream 374994 5493606 ~ 5493943 (+)
G128520 NA non-coding upstream 375948 5492664 ~ 5492989 (+)
G128562 NA non-coding downstream 4319 5873483 ~ 5873730 (+)
G128563 NA non-coding downstream 12929 5882093 ~ 5882325 (+)
G128564 NA non-coding downstream 13416 5882580 ~ 5882878 (+)
G128565 NA non-coding downstream 14291 5883455 ~ 5883667 (+)
G128566 NA non-coding downstream 14715 5883879 ~ 5906464 (+)
CI01000026_04556074_04556964 FOXB1B, FOXB1, FOXB1A other upstream 1312620 4555776 ~ 4557613 (+)
G128137 NA other upstream 1437736 4430562 ~ 4431201 (+)
CI01000026_04327206_04331151 DOK4, DOK5 other upstream 1536852 4327206 ~ 4332085 (+)
G127979 NA other upstream 2105951 3752551 ~ 3762986 (+)
CI01000026_02659356_02660297 NA other upstream 3208108 2658605 ~ 2660829 (+)
G128585 NA other downstream 80649 5949813 ~ 5950122 (+)
G128601 NA other downstream 114715 5983879 ~ 5991761 (+)
G128757 NA other downstream 457032 6326196 ~ 6326785 (+)
G130552 NA other downstream 1225889 7095053 ~ 7096652 (+)
G130967 NA other downstream 2319210 8188374 ~ 8189073 (+)

Expression


Co-expression Network