G128565


Basic Information

Item Value
gene id G128565
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 5883455 ~ 5883667 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU146068
GCCCATCTTAGTGGAAGGCTCCCACGTGGCCTGAACCACACTCGAATTGATCACCTTTGTGAACAAGTTTGGTGGTGCAGGGACTGCAAACACAGAAAAATGTATTTTCACAGAAAATACAACAGGTGGGAACTTTACCCTGAATGACATTGAATTAATACGCTGAGTCAAAAACACCTTGGAGTTAAATGCTTTATTGTTAAGAAATTTCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU146068 True 213 lncRNA 0.40 1 5883455 5883667

Neighbor

gene id symbol gene type direction distance location
CI01000026_05828041_05831860 NA coding upstream 51446 5828041 ~ 5832009 (+)
CI01000026_05820062_05827011 NA coding upstream 56030 5820062 ~ 5827425 (+)
CI01000026_05809690_05817205 NA coding upstream 65982 5809690 ~ 5817473 (+)
CI01000026_05793556_05805041 CTDSPL2B coding upstream 78330 5793556 ~ 5805125 (+)
CI01000026_05771496_05786357 CASC4 coding upstream 97098 5771496 ~ 5786357 (+)
CI01000026_06109467_06140429 MYBPC3 coding downstream 225800 6109467 ~ 6141599 (+)
CI01000026_06174460_06187224 NA coding downstream 290222 6173889 ~ 6187476 (+)
CI01000026_06234663_06316874 METTL15 coding downstream 350996 6234663 ~ 6316874 (+)
CI01000026_06332081_06337355 NA coding downstream 448072 6331739 ~ 6337396 (+)
CI01000026_06385815_06391975 NA coding downstream 502148 6385815 ~ 6392502 (+)
G128564 NA non-coding upstream 577 5882580 ~ 5882878 (+)
G128563 NA non-coding upstream 1130 5882093 ~ 5882325 (+)
G128562 NA non-coding upstream 9725 5873483 ~ 5873730 (+)
G128561 NA non-coding upstream 14291 5868937 ~ 5869164 (+)
G128560 NA non-coding upstream 14873 5868256 ~ 5868582 (+)
G128566 NA non-coding downstream 212 5883879 ~ 5906464 (+)
G128572 NA non-coding downstream 25932 5909599 ~ 5909982 (+)
G128573 NA non-coding downstream 26413 5910080 ~ 5910292 (+)
G128574 NA non-coding downstream 28866 5912533 ~ 5912792 (+)
G128575 NA non-coding downstream 35913 5919580 ~ 5919871 (+)
CI01000026_04556074_04556964 FOXB1B, FOXB1, FOXB1A other upstream 1327138 4555776 ~ 4557613 (+)
G128137 NA other upstream 1452254 4430562 ~ 4431201 (+)
CI01000026_04327206_04331151 DOK4, DOK5 other upstream 1551370 4327206 ~ 4332085 (+)
G127979 NA other upstream 2120469 3752551 ~ 3762986 (+)
CI01000026_02659356_02660297 NA other upstream 3222626 2658605 ~ 2660829 (+)
G128585 NA other downstream 66146 5949813 ~ 5950122 (+)
G128601 NA other downstream 100212 5983879 ~ 5991761 (+)
G128757 NA other downstream 442529 6326196 ~ 6326785 (+)
G130552 NA other downstream 1211386 7095053 ~ 7096652 (+)
G130967 NA other downstream 2304707 8188374 ~ 8189073 (+)

Expression


Co-expression Network