G128575


Basic Information

Item Value
gene id G128575
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 5919580 ~ 5919871 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU146079
TGTCTTTGTTGATATTTTGTGTGTCATTTCTTTTCTTTTAGCTTATTTTAGGAATGTTCATTAGTGTCCGCTGGACGCGCTGTTTGTGTGAATGTGAGAGAGAGTGTTTGGGGAGGCTCTTTTGTTTGTTTTAATGATTGAGTGAGCCGAGATCTTCATGCTCATTACAGCACTTCAAACACTGTTACCCATAATCAGGAGAAAGGAAAGACAGGAAAATAGAAGAAAAAAAAAATCAGATGATAAACTGCCCAGGGAGCCTGCTGCCCTATGGAGGGCCGTCCGGTACTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU146079 True 292 lncRNA 0.42 1 5919580 5919871

Neighbor

gene id symbol gene type direction distance location
CI01000026_05828041_05831860 NA coding upstream 87571 5828041 ~ 5832009 (+)
CI01000026_05820062_05827011 NA coding upstream 92155 5820062 ~ 5827425 (+)
CI01000026_05809690_05817205 NA coding upstream 102107 5809690 ~ 5817473 (+)
CI01000026_05793556_05805041 CTDSPL2B coding upstream 114455 5793556 ~ 5805125 (+)
CI01000026_05771496_05786357 CASC4 coding upstream 133223 5771496 ~ 5786357 (+)
CI01000026_06109467_06140429 MYBPC3 coding downstream 189596 6109467 ~ 6141599 (+)
CI01000026_06174460_06187224 NA coding downstream 254018 6173889 ~ 6187476 (+)
CI01000026_06234663_06316874 METTL15 coding downstream 314792 6234663 ~ 6316874 (+)
CI01000026_06332081_06337355 NA coding downstream 411868 6331739 ~ 6337396 (+)
CI01000026_06385815_06391975 NA coding downstream 465944 6385815 ~ 6392502 (+)
G128574 NA non-coding upstream 6788 5912533 ~ 5912792 (+)
G128573 NA non-coding upstream 9288 5910080 ~ 5910292 (+)
G128572 NA non-coding upstream 9598 5909599 ~ 5909982 (+)
G128566 NA non-coding upstream 13116 5883879 ~ 5906464 (+)
G128565 NA non-coding upstream 35913 5883455 ~ 5883667 (+)
G128576 NA non-coding downstream 1890 5921761 ~ 5922001 (+)
G128577 NA non-coding downstream 10344 5930215 ~ 5930451 (+)
G128578 NA non-coding downstream 10644 5930515 ~ 5930834 (+)
G128580 NA non-coding downstream 15510 5935381 ~ 5935631 (+)
G128581 NA non-coding downstream 20505 5940376 ~ 5940689 (+)
CI01000026_04556074_04556964 FOXB1B, FOXB1, FOXB1A other upstream 1363263 4555776 ~ 4557613 (+)
G128137 NA other upstream 1488379 4430562 ~ 4431201 (+)
CI01000026_04327206_04331151 DOK4, DOK5 other upstream 1587495 4327206 ~ 4332085 (+)
G127979 NA other upstream 2156594 3752551 ~ 3762986 (+)
CI01000026_02659356_02660297 NA other upstream 3258751 2658605 ~ 2660829 (+)
G128585 NA other downstream 29942 5949813 ~ 5950122 (+)
G128601 NA other downstream 64008 5983879 ~ 5991761 (+)
G128757 NA other downstream 406325 6326196 ~ 6326785 (+)
G130552 NA other downstream 1175182 7095053 ~ 7096652 (+)
G130967 NA other downstream 2268503 8188374 ~ 8189073 (+)

Expression


Co-expression Network