G128576


Basic Information

Item Value
gene id G128576
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 5921761 ~ 5922001 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU146080
CTCTCATCAGACAGTAATTTCACATCATCTTCTTCACACCGTTGTACAGATTTAATGGGCTGTCTGCTGCCCAGAGAGAAATGGTGAGAGAAAGAGAGATCAGAGAAGGAGGCAGAAAGAAAAGGGAGGGGGTGATAAAGAGACGCCCTCCCTCAACGTGCCCAAACACTACATGATCTCCCAAGAGGGGGAGCGACAGAGAGGGAAAGAAAGAAAAGAGAGGGAGAAATGGAGGGAGAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU146080 True 241 lncRNA 0.48 1 5921761 5922001

Neighbor

gene id symbol gene type direction distance location
CI01000026_05828041_05831860 NA coding upstream 89752 5828041 ~ 5832009 (+)
CI01000026_05820062_05827011 NA coding upstream 94336 5820062 ~ 5827425 (+)
CI01000026_05809690_05817205 NA coding upstream 104288 5809690 ~ 5817473 (+)
CI01000026_05793556_05805041 CTDSPL2B coding upstream 116636 5793556 ~ 5805125 (+)
CI01000026_05771496_05786357 CASC4 coding upstream 135404 5771496 ~ 5786357 (+)
CI01000026_06109467_06140429 MYBPC3 coding downstream 187466 6109467 ~ 6141599 (+)
CI01000026_06174460_06187224 NA coding downstream 251888 6173889 ~ 6187476 (+)
CI01000026_06234663_06316874 METTL15 coding downstream 312662 6234663 ~ 6316874 (+)
CI01000026_06332081_06337355 NA coding downstream 409738 6331739 ~ 6337396 (+)
CI01000026_06385815_06391975 NA coding downstream 463814 6385815 ~ 6392502 (+)
G128575 NA non-coding upstream 1890 5919580 ~ 5919871 (+)
G128574 NA non-coding upstream 8969 5912533 ~ 5912792 (+)
G128573 NA non-coding upstream 11469 5910080 ~ 5910292 (+)
G128572 NA non-coding upstream 11779 5909599 ~ 5909982 (+)
G128566 NA non-coding upstream 15297 5883879 ~ 5906464 (+)
G128577 NA non-coding downstream 8214 5930215 ~ 5930451 (+)
G128578 NA non-coding downstream 8514 5930515 ~ 5930834 (+)
G128580 NA non-coding downstream 13380 5935381 ~ 5935631 (+)
G128581 NA non-coding downstream 18375 5940376 ~ 5940689 (+)
G128582 NA non-coding downstream 18964 5940965 ~ 5941205 (+)
CI01000026_04556074_04556964 FOXB1B, FOXB1, FOXB1A other upstream 1365444 4555776 ~ 4557613 (+)
G128137 NA other upstream 1490560 4430562 ~ 4431201 (+)
CI01000026_04327206_04331151 DOK4, DOK5 other upstream 1589676 4327206 ~ 4332085 (+)
G127979 NA other upstream 2158775 3752551 ~ 3762986 (+)
CI01000026_02659356_02660297 NA other upstream 3260932 2658605 ~ 2660829 (+)
G128585 NA other downstream 27812 5949813 ~ 5950122 (+)
G128601 NA other downstream 61878 5983879 ~ 5991761 (+)
G128757 NA other downstream 404195 6326196 ~ 6326785 (+)
G130552 NA other downstream 1173052 7095053 ~ 7096652 (+)
G130967 NA other downstream 2266373 8188374 ~ 8189073 (+)

Expression


Co-expression Network