G130962


Basic Information

Item Value
gene id G130962
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 8175261 ~ 8176018 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU148927
AGTGTTGAAAGTGAGACATTTTGAAATGTCATGCCAAATATTGGCTCATTTTGGATTTCATGAGAGCTACACATTCCAAAAAAGTTGGGACAGGTAGCAATAAGAGGCCGGAAAAGTTAAATGTACATATAAGGAACAGCTGGAGGACCAATTTGCAACTTATTAGGTCAATTGGCAACATGATTGGGTATAAAAAGAGCCTCTCAGAGTAGCAGTGTCTCTCAGAAGTCAAGATGGGCAGAGGATCACCAATTCCCCCAATGCTGCGGTGAAAAATAGTGGAGCAATATCAGAAAGGAGTTTCTCAGAGAAAAATTGCAAAGAGTTTGAAGTTATCATCATCTACAGTGCATAATATCATCCAAAGATTCAGAGAATCTGGAACAATCTCTGTGCGTAAGGGTCAAGGCCAGAAAACCATACTGGATGCCCGTGATCTTCGGGCCCTTAGACGGCACTGCATCACATACAGGAATGCTACTGTAATGGAAATCACAACATGGGCTCAGGAATACTTCCAGAAAACATTGTCGGTGAACACAATCCACCGTGCCATTCGCCGTTGCCGGCTAAAACTCTATAGGTCAAAAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU148927 True 593 lncRNA 0.42 2 8175261 8176018

Neighbor

gene id symbol gene type direction distance location
CI01000026_08107438_08129873 ESRP2 coding upstream 44781 8107438 ~ 8130480 (+)
CI01000026_08103907_08104974 NA coding upstream 69662 8103814 ~ 8105599 (+)
CI01000026_08096241_08097257 NA coding upstream 77657 8095563 ~ 8097604 (+)
CI01000026_08031599_08081760 PLEKHG4 coding upstream 93356 8031599 ~ 8081905 (+)
CI01000026_07965621_07990576 SLC9A5 coding upstream 184618 7965576 ~ 7990643 (+)
CI01000026_08248451_08250136 DDX28 coding downstream 72353 8248371 ~ 8250221 (+)
CI01000026_08297901_08307596 CTRB1 coding downstream 121839 8297857 ~ 8307629 (+)
CI01000026_08313929_08318869 ATP6V0D1, ATP6V0D1.L coding downstream 135777 8311795 ~ 8318891 (+)
CI01000026_08421799_08434134 ZDHHC1 coding downstream 245665 8421683 ~ 8434193 (+)
CI01000026_08447474_08449558 TPPP3 coding downstream 271378 8447396 ~ 8450611 (+)
G130894 NA non-coding upstream 249129 7922174 ~ 7926132 (+)
G130910 NA non-coding upstream 297493 7877354 ~ 7877768 (+)
G130857 NA non-coding upstream 360395 7803928 ~ 7814866 (+)
G130843 NA non-coding upstream 388344 7785163 ~ 7786917 (+)
G130865 NA non-coding upstream 423488 7751567 ~ 7751773 (+)
G130986 NA non-coding downstream 26823 8202841 ~ 8203962 (+)
G130993 NA non-coding downstream 40932 8216950 ~ 8217316 (+)
G130994 NA non-coding downstream 41665 8217683 ~ 8218352 (+)
G131025 NA non-coding downstream 65857 8241875 ~ 8242082 (+)
G131028 NA non-coding downstream 68881 8244899 ~ 8245152 (+)
G130552 NA other upstream 1078609 7095053 ~ 7096652 (+)
G128757 NA other upstream 1848476 6326196 ~ 6326785 (+)
G128601 NA other upstream 2183500 5983879 ~ 5991761 (+)
G128585 NA other upstream 2225139 5949813 ~ 5950122 (+)
CI01000026_04556074_04556964 FOXB1B, FOXB1, FOXB1A other upstream 3618944 4555776 ~ 4557613 (+)
G130967 NA other downstream 12356 8188374 ~ 8189073 (+)
G131077 NA other downstream 325390 8501408 ~ 8506787 (+)
G132667 NA other downstream 1392721 9568739 ~ 9569160 (+)
G133192 NA other downstream 1983801 10159819 ~ 10161961 (+)

Expression


Co-expression Network