XLOC_008464 (usf1)


Basic Information

Item Value
gene id XLOC_008464
gene name usf1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 21252532 ~ 21262567 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00016938
TAATGTCAATCGAGGTACACATATTTGAGTTGATGCTGTGCGCATGCGCAGTTAAGTACGTTTCCTCTGGCTGCGGCTACTGTTGTAAACAAGACGCCTCGAGATCAGTAAACGTTCAGATTTTATAAGACAACAAGAAGTGGTAACACAAATTTTACTTGTTACATACTGACAGTGGAGATGAAAGGACAACCGAAAAGTTCTGAACCTGATGTCAGTGTTCCAGTCATTGAAGAAGGGGCAGTTGCTACTGCAGAAGACCCATCAGCAATCACAACTATTCAATCTGCTTCTACGTTTTCCACGGACCAGCCGATTAAATACCTTTTCAAGACGGAGGGAGCTGGGGGGCAGGTTACATACCGAGTAATCCAGGTTGCAGATGGACAGCTAGAGGCTCAACCTGATGGTACAACAGCTGTTAGTGTAGTGACTGGGTTTCCTGCCACAACACAGCCGGTTACGCAGGCTGTTTTCTCTCAGTCAGAAGGCTTGGAGGGAGATGGCACAGAAACCCATTACACATATTATCCTGCTACTATCTCAGATGCTACTGCAGGCACAATGGTGACAGGTGTTCAGGCCTCAGATGCTCTGCTCAGTCAGAGTGCTTCTGCAGGTCAGTTGTATGTTATGATGTCCCCACAGGAGGTCCTTACCGGAGCCAACCAGAGGTCTATTGCACCTCGTACACAAGCTTACAATGCCAAATCGGAGGGTCCGAGAACTTCAAGAGATGAGAAAAGACGAGCTCAGCACAATGAAGTTGAGCGAAGAAGAAGAGACAAAATCAATAACTGGATTGTTCAGCTCTCAAAAACAATTCCAGACTGCACCATCGACTCCACTAAAACTGGACAGAGTAAAGGTGGGATCCTATCAAAGGCCTGTGATTACATTCAAGAGCTTCGACAAAGTAACAGCCGGTTAGGAGATGAGCTGAACAGCATTGAGAGGTTGAGGATGGATAACCAGCTGTTACGACAAGAGgtTGAAGACTGGAAATCTAAGAATCAGATATTGAGGAACCAGCTCCGGCAGCATGGCATAGTTGCAGCAGCAAGTGCAGATCCTCAGTAAAgaatttgtcatttgtttttatttatcttgAACAAGAGGACGCGTGTAATGCAGTATTCAGTATATTGGTGATGATTCTTCATCAGGATCTTGCCTTATGTacatatttctttttctttctttgtgcACCTCTTCATACTTTCATGTAATAAAGCATTCTTTTTGTATGTGTCATGACAGGTCAGATGAATTTGTTGATTTTGTACTTTTACATCTATTGTTTGTGGAATAATATGTTAACTTTTTGAatgcattttcaaatattttgtacATTGAAAAGCGATTTTCAGTTTTGTCTGAATGGTAAGCATGTCAAATAACTGCCTAATATTTAACAGTTCGCAACATGGTATGATATTATAGTAGATTTCATTATGCAGATTGATGAAATAAATAGACGACTTCAAtttcaatgctttttttatttttgatcatttgaGTTTTCAGAATTTACAAGTATGTGTtgtcttaaggttttttttttcaaatgccaAGTATTGTTTTTAAGAAATGGGTTAAAATTTCTCCATATTATgcacatgtttgttttatttttagttaaatttttagtttttagtttttaacctATTTACCTTAAATGGTTTTGTCAATAATTTTTGTCCTATAAGCATCAACTTTATGGCAAGTCCTTTATTCCTTAACTTATGAGTATCTGTTTTCAATGTTATTTCTTTTGAAGCTAACTTTTTAATGACGAACAGTAGCTTTGTTTTACTAATCTCTGTTAATTGCATACATTTGGCAGATGTTTTATTAGGCTATTTCAGTAATGTCTTTAATACTCAATTTGTACTCATTCCTTTGTTGCTAGTTACTGTGTCATTAGTGGCCTGTGACTTTTTCAGCTGTTTCTGATAACAAATGATGATACAACTGAAATCTATGAAAGTCTATGGAATAAGTAAGGTATAACTTCTGAATGTAgattgcatgattttttttttttgggggcaAGTCGGGGTGAACTTTGATGCTAATCGAATGCAGTTGCCTTTTTTCATGCACAAAGGGCAACTGTTGaaagttaacattttttaaacaatcaaatttccAATAGTTTTTGTAATCTactttattatattctatatattttcACCTAATTCTTTTTAcctaattttattgtaaataacaCTTGGAACATATATGGCATATGGAAACATTCTGGTTGctgtcagtgttgccagattgggtggtTTTGAAATGGATTATGCAGGTAAAAATCTGCATTGGTGGGCTGACAaaatttgggcggttttgaaatgtaaattttatattttaaaattatattcatataattttacacacattttatttaagttatttaacaaaacataactgtgtcATCCCAATCCATTTagttagtagtgaccagtgcatagcaCAAACCGTGTGGGCCACCCGAAAGAGGAGGTGAAAgaaagttgtatcaaaatctgactcccctACAAATGCACGCGCATCACACAGCGCATGTGGTTAAACTCGcatctataattttttttccgcAATTGACAACAAGAACAAACACAGAGGTGCTGGCCCAATTTATACCCCATtttgaaagtaaaacatactctagTGTAATCTCAGCAACATTAACTGCAGTGTGGGTGAGAGGTGTTTCTATATGATCcagttatgttgtggttctgtgtTCGTTGCTTTATGGTTAAAAATTATGACAGTTaaaataactaggttaattttgatttaaataaatggaaattaaataaactaatattttggccgtttgtgtgtgtttgggca
>TCONS_00016939
GAGTTGATGCTGTGCGCATGCGCAGTTAAGTACGTTTCCTCTGGCTGCGGCTACTGTTGTAAACAAGACGCCTCGAGATCAGTAAACGATTTTATAAGACAACAAGAAGTGGTAACACAAATTTTACTTGTTACATACTGACAGTGGAGATGAAAGGACAACCGAAAAGTTCTGAACCTGATGTCAGTGTTCCAGTCATTGAAGAAGGGGCAGTTGCTACTGCAGAAGACCCATCAGCAATCACAACTATTCAATCTGCTTCTACGTTTTCCACGGACCAGCCGATTAAATACCTTTTCAAGACGGAGGGAGCTGGGGGGCAGGTAGGGGAGCTGTACCCTCCCTCAGGGCAGGTTACATACCGAGTAATCCAGGTTGCAGATGGACAGCTAGAGGCTCAACCTGATGGTACAACAGCTGTTAGTGTAGTGACTGGGTTTCCTGCCACAACACAGCCGGTTACGCAGGCTGTTTTCTCTCAGTCAGAAGGCTTGGAGGGAGATGGCACAGAAACCCATTACACATATTATCCTGCTACTATCTCAGATGCTACTGCAGGCACAATGGTGACAGGTGTTCAGGCCTCAGATGCTCTGCTCAGTCAGAGTGCTTCTGCAGGTCAGTTGTATGTTATGATGTCCCCACAGGAGGTCCTTACCGGAGCCAACCAGAGGTCTATTGCACCTCGTACACAAGCTTACAATGCCAAATCGGAGGGTCCGAGAACTTCAAGAGATGAGAAAAGACGAGCTCAGCACAATGAAGTTGAGCGAAGAAGAAGAGACAAAATCAATAACTGGATTGTTCAGCTCTCAAAAACAATTCCAGACTGCACCATCGACTCCACTAAAACTGGACAGAGTAAAGGTGGGATCCTATCAAAGGCCTGTGATTACATTCAAGAGCTTCGACAAAGTAACAGCCGGTTAGGAGATGAGCTGAACAGCATTGAGAGGTTGAGGATGGATAACCAGCTGTTACGACAAGAGgtTGAAGACTGGAAATCTAAGAATCAGATATTGAGGAACCAGCTCCGGCAGCATGGCATAGTTGCAGCAGCAAGTGCAGATCCTCAGTAAAgaatttgtcatttgtttttatttatcttgAACAAGAGGACGCGTGTAATGCAGTATTCAGTATATTGGTGATGATTCTTCATCAGGATCTTGCCTTATGTacatatttctttttctttctttgtgcACCTCTTCATACTTTCATGTAATAAAGCATTCTTTTTGTATGTGTCATGACAGGTCAGATGAATTTGTTGATTTTGTACTTTTACATCTATTGTTTGTGGAATAATATGTTAACTTTTTGAatgcattttcaaatattttgtacATTGAAAAGCGATTTTCAGTTTTGTCTGAATGGTAAGCATGTCAAATAACTGCCTAATATTTAACAGTTCGCAACATGGTATGATATTATAGTAGATTTCATTATGCAGATTGATGAAATAAATAGACGACTTCAAtttcaa
>TCONS_00016940
GCAGTTAAGTACGTTTCCTCTGGCTGCGGCTACTGTTGTAAACAAGACGCCTCGAGATCAGTAAACGTTCAGATTTTATAAGACAACAAGAAGTGGTAACACAAATTTTACTTGTTACATACTGACAGTGGAGATGAAAGGACAACCGAAAAGTTCTGAACCTGATGTCAGTGTTCCAGTCATTGAAGAAGTTGCTACTGCAGAAGACCCATCAGCAATCACAACTATTCAATCTGCTTCTACGTTTTCCACGGACCAGCCGATTAAATACCTTTTCAAGACGGAGGGAGCTGGGGGGCAGGTAGGGGAGCTGTACCCTCCCTCAGGGCAGGTTACATACCGAGTAATCCAGGTTGCAGATGGACAGCTAGAGGCTCAACCTGATGGTACAACAGCTGTTAGTGTAGTGACTGGGTTTCCTGCCACAACACAGCCGGTTACGCAGGCTGTTTTCTCTCAGTCAGAAGGCTTGGAGGGAGATGGCACAGAAACCCATTACACATATTATCCTGCTACTATCTCAGATGCTACTGCAGGCACAATGGTGACAGGTGTTCAGGCCTCAGATGCTCTGCTCAGTCAGAGTGCTTCTGCAGGTCAGTTGTATGTTATGATGTCCCCACAGGAGGTCCTTACCGGAGCCAACCAGAGGTCTATTGCACCTCGTACACAAGCTTACAATGCCAAATCGGAGGGTCCGAGAACTTCAAGAGATGAGAAAAGACGAGCTCAGCACAATGAAGTTGAGCGAAGAAGAAGAGACAAAATCAATAACTGGATTGTTCAGCTCTCAAAAACAATTCCA
>TCONS_00016941
GCAGTTAAGTACGTTTCCTCTGGCTGCGGCTACTGTTGTAAACAAGACGCCTCGAGATCAGTAAACGTTCAGATTTTATAAGACAACAAGAAGTGGTAACACAAATTTTACTTGTTACATACTGACAGTGGAGATGAAAGGACAACCGAAAAGTTCTGAACCTGATGTCAGTGTTCCAGTCATTGAAGAAGTTGCTACTGCAGAAGACCCATCAGCAATCACAACTATTCAATCTGCTTCTACGTTTTCCACGGACCAGCCGATTAAATACCTTTTCAAGACGGAGGGAGCTGGGGGGCAGGTTACATACCGAGTAATCCAGGTTGCAGATGGACAGCTAGAGGCTCAACCTGATGGTACAACAGCTGTTAGTGTAGTGACTGGGTTTCCTGCCACAACACAGCCGGTTACGCAGGCTGTTTTCTCTCAGTCAGAAGGCTTGGAGGGAGATGGCACAGAAACCCATTACACATATTATCCTGCTACTATCTCAGATGCTACTGCAGGCACAATGGTGACAGGTGTTCAGGCCTCAGATGCTCTGCTCAGTCAGAGTGCTTCTGCAGGTCAGTTGTATGTTATGATGTCCCCACAGGAGGTCCTTACCGGAGCCAACCAGAGGTCTATTGCACCTCGTACACAAGCTTACAATGCCAAATCGGAGGGTCCGAGAACTTCAAGAGATGAGAAAAGACGAGCTCAGCACAATGAAGTTGAGCGAAGAAGAAGAGACAAAATCAATAACTGGATTGTTCAGCTCTCAAAAACAATTCCAGACTGCACCATCGACTCCACTAAAACTGGACAGAGTAAAGGTGGGATCCTATCAAAGGCCTGTGATTACATTCAAGAGCTTCGACAAAGTAACAGCCGGTTAGGAGATGAGCTGAACAGCATTGAGAGGTTGAGGATGGATAACCAGCTGTTACGA
>TCONS_00016942
GCAGTTAAGTACGTTTCCTCTGGCTGCGGCTACTGTTGTAAACAAGACGCCTCGAGATCAGTAAACGTTCAGATTTTATAAGACAACAAGAAGTGGTAACACAAATTTTACTTGTTACATACTGACAGTGGAGATGAAAGGACAACCGAAAAGTTCTGAACCTGATGTCAGTGTTCCAGTCATTGAAGAAGGGGCAGTTGCTACTGCAGAAGACCCATCAGCAATCACAACTATTCAATCTGCTTCTACGTTTTCCACGGACCAGCCGATTAAATACCTTTTCAAGACGGAGGGAGCTGGGGGGCAGGTTACATACCGAGTAATCCAGGTTGCAGATGGACAGCTAGAGGCTCAACCTGATGGTACAACAGCTGTTAGTGTAGTGACTGGGTTTCCTGCCACAACACAGCCGGTTACGCAGGCTGTTTTCTCTCAGTCAGAAGGCTTGGAGGGAGATGGCACAGAAACCCATTACACATATTATCCTGCTACTATCTCAGATGCTACTGCAGGCACAATGGTGACAGGTGTTCAGGCCTCAGATGCTCTGCTCAGTCAGAGTGCTTCTGCAGGTCAGTTGTATGTTATGATGTCCCCACAGGAGGTCCTTACCGGAGCCAACCAGAGGTCTATTGCACCTCGTACACAAGCTTACAATGCCAAATCGGAGGGTCCGAGAACTTCAAGAGATGAGAAAAGACGAGCTCAGCACAATGAAGTTGAGCGAAGAAGAAGAGACAAAATCAATAACTGGATTGTTCAGCTCTCAAAAACAATTCCAGACTGCACCATCGACTCCACTAAAACTGGACAGGCATAGTAAAGGTGGGATCCTATCAAAGGCCTGTGATTACATTCAAGAGCTTCGACAAAGTAACAGCCGGTTAGGAGATGAGCTGAACAGCATTGAGAGGTTGAGGATGGATAACCAGCTGTTACGACAAGAGgtTGAAGACTGGAAATCTAAGAATCAGATATTGAGGAACCAGCTCCGGCAGCATGGCATAGTTGCAGCAGCAAGTGCAGATCCTCAGTAAAgaatttgtcatttgtttttatttatcttgAACAAGAGGACGCGTGTAATGCAGTATTCAGTATATTGGTGATGATTCTTCATCAGGATCTTGCCTTATGTacatatttctttttctttctttgtgcACCTCTTCATACTTTCATGTAATAAAGCATTCTTTTTGTATGTGTCATGACAGGTCAGATGAATTTGTTGATTTTGTACTTTTACATCTATTGTTTGTGGAATAATATGTTAACTTTTTGAatgcattttcaaatattttgtacATTGAAAAGCGATTTTCAGTTTTGTCTGAATGGTAAGCATGTCAAATAACTGCCTAATATTTAACAGTTCGCAACATGGTATGATATTATAGTAGATTTCATTATGCAGATTGATGAAATAAATAGACGACTTCAAtttcaa
>TCONS_00016943
AGTTAAGTACGTTTCCTCTGGCTGCGGCTACTGTTGTAAACAAGACGCCTCGAGATCAGTAAACGTTCAGATTTTATAAGACAACAAGAAGTGGTAACACAAATTTTACTTGTTACATACTGACAGTGGAGATGAAAGGACAACCGAAAAGTTCTGAACCTGATGTCAGTGTTCCAGTCATTGAAGAAGAAGACCCATCAGCAATCACAACTATTCAATCTGCTTCTACGTTTTCCACGGACCAGCCGATTAAATACCTTTTCAAGACGGAGGGAGCTGGGGGGCAGGTTACATACCGAGTAATCCAGGTTGCAGATGGACAGCTAGAGGCTCAACCTGATGGTACAACAGCTGTTAGTGTAGTGACTGGGTTTCCTGCCACAACACAGCCGGTTACGCAGG
>TCONS_00016944
AAGTACGTTTCCTCTGGCTGCGGCTACTGTTGTAAACAAGACGCCTCGAGATCAGTAAACGTTCAGATTTTATAAGACAACAAGAAGTGGTAACACAAATTTTACTTGTTACATACTGACAGTGGAGATGAAAGGACAACCGAAAAGTTCTGAACCTGATGTCAGTGTTCCAGTCATTGAAGAAGGGGCAGTTGCTACTGCAGAAGACCCATCAGCAATCACAACTATTCAATCTGCTTCTACGTTTTCCACGGACCAGCCGATTAAATACCTTTTCAAGACGGAGGGAGCTGGGGGGCAGGTAGGGGAGCTGTACCCTCCCTCAGGGCAGGTTACATACCGAGTAATCCAGGTTGCAGATGGACAGCTAGAGGCTCAACCTGATGGTACAACAGCTGTTAGTGTAGTGACTGGGTTTCCTGCCACAACACAGCCGGTTACGCAGGCTGTTTTCTCTCAGTCAGAAGGCTTGGAGGGAGATGGCACAGAAACCCATTACACATATTATCCTGCTACTATCTCAGATGCTACTGCAGGCACAATGGTGACAGGTGTTCAGGCCTCAGATGCTCTGCTCAGTCAGAGTGCTTCTGCAGGTCAGTTGTATGTTATGATGTCCCCACAGGAGGTCCTTACCGGAGCCAACCAGAGGTCTATTGCACCTCGTACACAAGCTTACAATGCCAAATCGGAGGGTCCGAGAACTTCAAGAGATGAGAAAAGACGAGCTCAGCACAATGAAGTTGAGCGAAGAAGAAGAGACAAAATCAATAACTGGATTGTTCAGCTCTCAAAAACAATTCCAGACTGCACCATCGACTCCACTAAAACTGGACAG
>TCONS_00016945
AGTACGTTTCCTCTGGCTGCGGCTACTGTTGTAAACAAGACGCCTCGAGATCAGTAAACGTTCAGATTTTATAAGACAACAAGAAGTGGTAACACAAATTTTACTTGTTACATACTGACAGTGGAGATGAAAGGACAACCGAAAAGTTCTGAACCTGATGTCAGTGTTCCAGTCATTGAAGAAGTTGCTACTGCAGAAGACCCATCAGCAATCACAACTATTCAATCTGCTTCTACGTTTTCCACGGACCAGCCGATTAAATACCTTTTCAAGACGGAGGGAGCTGGGGGGCAGGTAGGGGAGCTGTACCCTCCCTCAGGGCAGGTTACATACCGAGTAATCCAGGTTGCAGATGGACAGCTAGAGGCTCAACCTGATGGTACAACAGCTGTTAGTGTAGTGACTGGGTTTCCTGCCACAACACAGCCGGTTACGCAGGCTGTTTTCTCTCAGTCAGAAGGCTTGGAGGGAGATGGCACAGAAACCCATTACACATATTATCCTGCTACTATCTCAGATGCTACTGCAGGCACAATGGTGACAGGTGTTCAGGCCTCAGATGCTCTGCTCAGTCAGAGTGCTTCTGCAGGTCAGTTGTATGTTATGATGTCCCCACAGGAGGTCCTTACCGGAGCCAACCAGAGCAAATCGGAGGGTCCGAGAACTTCAAGAGATGAGAAAAGACGAGCTCAGCACAATGAAGTTGAGCGAAGAAGAAGAGACAAAATCAATAACTGGATTGTTCAGCTCTCAAAAACAATTCCA
>TCONS_00016946
CTGGCTGCGGCTACTGTTGTAAACAAGACGCCTCGAGATCAGTAAACGATTTTATAAGACAACAAGAAGTGGTAACACAAATTTTACTTGTTACATACTGACAGTGGAGATGAAAGGACAACCGAAAAGTTCTGAACCTGATGTCAGTGTTCCAGTCATTGAAGAAGGGGCAGTTGCTACTGCAGAAGACCCATCAGCAATCACAACTATTCAATCTGCTTCTACGTTTTCCACGGACCAGCCGATTAAATACCTTTTCAAGACGGAGGGAGCTGGGGGGCAGGTTACATACCGAGTAATCCAGGTTGCAGATGGACAGCTAGAGGCTCAACCTGATGGTACAACAGCTGTTAGTGTAGTGACTGGGTTTCCTGCCACAACACAGCCGGTTACGCAGGCTGTTTTCTCTCAGTCAGAAGGCTTGGAGGGAGATGGCACAGAAACCCATTACACATATTATCCTGCTACTATCTCAGATGCTACTGCAGGCACAATGGTGACAGGTGTTCAGGCCTCAGATGCTCTGCTCAGTCAGAGTGCTTCTGCAGGTCAGTTGTATGTTATGATGTCCCCACAGGA
>TCONS_00016947
TAAACAAGACGCCTCGAGATCAGTAAACGTTCAGATTTTATAAGACAACAAGAAGTGGTAACACAAATTTTACTTGTTACATACTGACAGTGGAGATGAAAGGACAACCGAAAAGTTCTGAACCTGATGTCAGTGTTCCAGTCATTGAAGAAGGGGCAGTTGCTACTGCAGAAGACCCATCAGCAATCACAACTATTCAATCTGCTTCTACGTTTTCCACGGACCAGCCGATTAAATACCTTTTCAAGACGGAGGGAGCTGGGGGGCAGGTTACATACCGAGTAATCCAGGTTGCAGATGGACAGCTAGAGGCTCAACCTGATGGTACAACAGCTGTTAGTGTAGTGACTGGGTTTCCTGCCACAACACAGCCGGTTACGCAGGCTGTTTTCTCTCAGTCAGAAGGCTTGGAGGGAGATGGCACAGAAACCCATTACACATATTATCCTGCTACTATCTCAGATGCTACTGCAGGCACAATGGTGACAGGTGTTCAGGCCTCAGATGCTCTGCTCAGTCAGAGTGCTTCTGCAGGTCAGTTGTATGTTATGATGTCCCCACAGGAGGTCCTTACCGGAGCCAACCAGAGCAAATCGGAGGGTCCGAGAACTTCAAGAGATGAGAAAAGACGAGCTCAGCACAATGAAGTTGAGCGAAGAAGAAGAGACAAAATCAATAACTGGATTGTTCAGCTCTCAAAAACAATTCCA
>TCONS_00016948
TACATACCGAGTAATCCAGGTTGCAGATGGACAGCTAGAGGCTCAACCTGATGGTACAACAGCTGTTAGTGTAGTGACTGGGTTTCCTGCCACAACACAGCCGGTTACGCAGGCTGTTTTCTCTCAGTCAGAAGGCTTGGAGGGAGATGGCACAGAAACCCATTACACATATTATCCTGCTACTATCTCAGATGCTACTGCAGGCACAATGGTGACAGGTGTTCAGGCCTCAGATGCTCTGCTCAGTCAGAGTGCTTCTGCAGGTCAGTTGTATGTTATGATGTCCCCACAGGAGGTCCTTACCGGAGCCAACCAGAGCAAATCGGAGGGTCCGAGAACTTCAAGAGATGAGAAAAGACGAGCTCAGCACAATGAAGTTGAGCGAAGAAGAAGAGACAAAATCAATAACTGGATTGTTCAGCTCTCAAAAACAATTCCAGACTGCACCATCGACTCCACTAAAACTGGACAGAGTAAAGGTGGGATCCTATCAAAGGCCTGTGATTACATTCAAGAGCTTCGACAAAGTAACAGCCGGTTAGGAGATGAGCTGAACAGCATTGAGAGGTTGAGGATGGATAACCAGCTGTTACGACAAGAGgtTGAAGACTGGAAATCTAAGAATCAGATATTGAGGAACCAGCTCCGGCAGCATGGCATAGTTGCAGCAGCAAGTGCAGATCCTCAGTAAAgaatttgtcatttgtttttatttatcttgAACAAGAGGACGCGTGTAATGCAGTATTCAGTATATTGGTGATGATTCTTCATCAGGATCTTGCCTTATGTacatatttctttttctttctttgtgcACCTCTTCATACTT

Function

symbol description
usf1 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Human ortholog(s) of this gene implicated in cardiovascular system disease and type 2 diabetes mellitus. Orthologous to human USF1 (upstream transcription factor 1).

GO:

id name namespace
GO:0046983 protein dimerization activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040426-1072 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Human ortholog(s) of this gene implicated in cardiovascular system disease and type 2 diabetes mellitus. Orthologous to human USF1 (upstream transcription factor 1).

Ensembl:

ensembl_id ENSDARG00000041689

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00016938 False 2868 mRNA 0.37 11 21252532 21262567
TCONS_00016939 False 1492 mRNA 0.42 11 21252558 21261192
TCONS_00016940 False 805 mRNA 0.47 9 21252579 21258324
TCONS_00016941 False 931 mRNA 0.46 10 21252579 21258577
TCONS_00016942 False 1450 nonsense_mediated_decay 0.42 11 21252579 21261192
TCONS_00016943 False 402 mRNA 0.46 5 21252581 21254912
TCONS_00016944 False 838 mRNA 0.47 9 21252585 21258357
TCONS_00016945 False 765 mRNA 0.47 9 21252586 21258324
TCONS_00016946 False 579 mRNA 0.47 7 21252598 21257836
TCONS_00016947 False 710 mRNA 0.46 9 21252617 21258324
TCONS_00016948 True 832 mRNA 0.45 7 21254800 21260920

Neighbor

gene id symbol gene type direction distance location
XLOC_008462 NA coding upstream 975 21247526 ~ 21251557 (+)
XLOC_008461 NA coding upstream 6698 21240424 ~ 21245834 (+)
XLOC_008460 si:dkey-52d15.2 coding upstream 48061 21202820 ~ 21204471 (+)
XLOC_008459 CR626907.3 coding upstream 54246 21180094 ~ 21198286 (+)
XLOC_008458 CR626907.1 coding upstream 75483 21167142 ~ 21177049 (+)
XLOC_008465 gkup coding downstream 350 21262917 ~ 21275683 (+)
XLOC_008466 ubash3bb coding downstream 14168 21276735 ~ 21320638 (+)
XLOC_008467 NA coding downstream 60479 21323046 ~ 21495896 (+)
XLOC_008468 dre-mir-100-1 coding downstream 175066 21437633 ~ 21437728 (+)
XLOC_008469 dre-let-7a-2 coding downstream 175309 21437876 ~ 21437959 (+)
XLOC_008463 BX663520.1 misc upstream 250 21252191 ~ 21252282 (+)
XLOC_008457 NA non-coding upstream 87959 21164035 ~ 21164573 (+)
XLOC_008470 NA non-coding downstream 257843 21520410 ~ 21542918 (+)
XLOC_008472 NA non-coding downstream 445216 21707783 ~ 21719970 (+)

Expression


Co-expression Network