G133521



Basic Information


Item Value
gene id G133521
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 11333873 ~ 11334103 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU151805
GTTGATGTTAAAAAAAAATGTTAACTGATGTGAGGCAGTGAGTGTATTCTACTGGGCTGCTGTGATATACAGATATAAAACATTATGCCCTGACAAAACACTACTTTTTATGGAGAGTTTGGCAGTGTGGTGATGTTTAATATGAATGAATAAGGCAATCTTACTGTACACCTGATGATGTCATGATCACATCTCCAGGAGAGTAGTCAGCACCGAGAAAACTGCACGGAC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU151805 True 231 lncRNA 0.39 1 11333873 11334103

Neighbor


gene id symbol gene type direction distance location
CI01000026_11298219_11305000 NA coding upstream 28860 11298219 ~ 11305013 (+)
CI01000026_11266022_11278889 NA coding upstream 54974 11266022 ~ 11278899 (+)
CI01000026_11262923_11264188 TNNI2A.4, TNNI2B.2, TNNI2B.1 coding upstream 69339 11261081 ~ 11264534 (+)
CI01000026_11241496_11246081 NA coding upstream 87792 11241496 ~ 11246204 (+)
CI01000026_11239339_11240254 TNNI2A.4, TNNI2B.2, TNNI2B.1 coding upstream 93440 11239339 ~ 11240433 (+)
CI01000026_11403059_11415298 PTPN5 coding downstream 68956 11403059 ~ 11415512 (+)
CI01000026_11436071_11446054 KIAA0232 coding downstream 101398 11435501 ~ 11446322 (+)
CI01000026_11456632_11473446 TBC1D14 coding downstream 122529 11456632 ~ 11473653 (+)
CI01000026_11483300_11485455 TADA2B coding downstream 149197 11483300 ~ 11486080 (+)
CI01000026_11497016_11677778 SORCS2 coding downstream 162913 11497016 ~ 11677778 (+)
G133520 NA non-coding upstream 186 11333341 ~ 11333687 (+)
G133519 NA non-coding upstream 1598 11332066 ~ 11332275 (+)
G133516 NA non-coding upstream 9736 11321804 ~ 11324137 (+)
G133515 NA non-coding upstream 12320 11321255 ~ 11321553 (+)
G133514 NA non-coding upstream 12743 11320865 ~ 11321130 (+)
G133522 NA non-coding downstream 1367 11335470 ~ 11336831 (+)
G133523 NA non-coding downstream 6536 11340639 ~ 11342488 (+)
G133529 NA non-coding downstream 13860 11347963 ~ 11348924 (+)
G133530 NA non-coding downstream 15209 11349312 ~ 11349606 (+)
G133528 NA non-coding downstream 20059 11354162 ~ 11354451 (+)
CI01000026_11075931_11078249 MDK, MDKA other upstream 254793 11075784 ~ 11079080 (+)
G133192 NA other upstream 1171912 10159819 ~ 10161961 (+)
G132667 NA other upstream 1764713 9568739 ~ 9569160 (+)
G131077 NA other upstream 2827086 8501408 ~ 8506787 (+)
G133542 NA other downstream 142014 11476117 ~ 11477544 (+)

Expression



Co-expression Network