Gene
RNA
| Item | Value |
|---|---|
| gene id | G135007 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000026 |
| NCBI id | null |
| chromosome length | 17172400 |
| location | 13195267 ~ 13195982 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU153539 | True | 559 | lncRNA | 0.33 | 2 | 13195267 | 13195982 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000026_13053390_13065531 | NETO2 | coding | downstream | 129736 | 13051213 ~ 13065531 (-) |
| CI01000026_13039331_13039570 | NA | coding | downstream | 155697 | 13039271 ~ 13039570 (-) |
| CI01000026_13033698_13034704 | NA | coding | downstream | 159647 | 13033625 ~ 13035620 (-) |
| CI01000026_13010221_13016325 | CLG3H16ORF87, C5H16ORF87 | coding | downstream | 178942 | 13009857 ~ 13016325 (-) |
| CI01000026_12985635_12997297 | NA | coding | downstream | 197970 | 12985362 ~ 12997297 (-) |
| CI01000026_13299234_13300178 | NA | coding | upstream | 102500 | 13298482 ~ 13300940 (-) |
| CI01000026_13744060_13791879 | CDH8 | coding | upstream | 548078 | 13744060 ~ 13791879 (-) |
| CI01000026_14156809_14170720 | CDH11 | coding | upstream | 960367 | 14156349 ~ 14170720 (-) |
| CI01000026_14376741_14381102 | NA | coding | upstream | 1180588 | 14376570 ~ 14382093 (-) |
| CI01000026_14680424_14682203 | TK2 | coding | upstream | 1484377 | 14680359 ~ 14682203 (-) |
| G134986 | NA | non-coding | downstream | 177189 | 13017868 ~ 13018078 (-) |
| G134931 | NA | non-coding | downstream | 323528 | 12867251 ~ 12871739 (-) |
| G134921 | NA | non-coding | downstream | 345487 | 12849353 ~ 12849780 (-) |
| G134916 | NA | non-coding | downstream | 361835 | 12833186 ~ 12833432 (-) |
| G134680 | NA | non-coding | downstream | 412274 | 12782715 ~ 12782993 (-) |
| G135043 | NA | non-coding | upstream | 108313 | 13304295 ~ 13304578 (-) |
| G135053 | NA | non-coding | upstream | 129209 | 13325191 ~ 13325401 (-) |
| G135223 | NA | non-coding | upstream | 424125 | 13620107 ~ 13620327 (-) |
| G135241 | NA | non-coding | upstream | 448798 | 13644780 ~ 13645099 (-) |
| G133802 | NA | other | downstream | 1888086 | 11301915 ~ 11307181 (-) |
| G133790 | NA | other | downstream | 2357662 | 10834015 ~ 10859589 (-) |
| CI01000026_10788054_10788652 | CD59 | other | downstream | 2405113 | 10787339 ~ 10789709 (-) |
| CI01000026_10347872_10351783 | CEBPA | other | downstream | 2846310 | 10347746 ~ 10351783 (-) |
| G132721 | NA | other | downstream | 3644623 | 9550030 ~ 9550644 (-) |
| G136110 | NA | other | upstream | 1358935 | 14554917 ~ 14555436 (-) |
| CI01000026_16756776_16760261 | RBPMS2A, RBPMS2B, RBPMS2 | other | upstream | 3560747 | 16756729 ~ 16761341 (-) |
| G137667 | NA | other | upstream | 3610382 | 16806364 ~ 16808372 (-) |
| G137914 | NA | other | upstream | 3787269 | 16983251 ~ 16984352 (-) |
| G137967 | NA | other | upstream | 3872366 | 17068348 ~ 17069433 (-) |
