G136679


Basic Information

Item Value
gene id G136679
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 15498151 ~ 15498389 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU155298
TGCTAGCCTCAAACATTGAAAATGATACAGCACGTCACAGTTTCCACAGCAGTTGCAATAGTTGCAGCAGCAGCAGGCTCTGATCCATTGCAACATCACAGGGCAGGGGCTTGTCCCTGGGGGCTTGTAATTGGTTAGGGTAAAGGAGTGTTCAGGGCCTGCTTTTGTCTCACCGGTAATGGGAGATGAGAGCTTAGGAGTCGGGCCTTTGGCAGTGGCCTATTGCCACCGATCAGTCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU155298 True 239 lncRNA 0.52 1 15498151 15498389

Neighbor

gene id symbol gene type direction distance location
CI01000026_15462834_15471168 CCNE1 coding upstream 26844 15462834 ~ 15471307 (+)
CI01000026_15453381_15456567 NA coding upstream 41578 15452718 ~ 15456573 (+)
CI01000026_15434996_15435874 NA coding upstream 62027 15434448 ~ 15436124 (+)
CI01000026_15428529_15431580 POP4 coding upstream 66136 15428529 ~ 15432015 (+)
CI01000026_15144573_15146721 UQCRFS1 coding upstream 351328 15142586 ~ 15146823 (+)
CI01000026_15701090_15742400 ZNF536 coding downstream 202701 15701090 ~ 15742400 (+)
CI01000026_15796823_15797870 NA coding downstream 298434 15796823 ~ 15798627 (+)
CI01000026_15864670_15915098 NA coding downstream 366155 15864544 ~ 15915162 (+)
CI01000026_15963447_15967856 NA coding downstream 464133 15962522 ~ 15967889 (+)
CI01000026_16112803_16120445 NA coding downstream 613892 16112281 ~ 16121033 (+)
G136646 NA non-coding upstream 87763 15409880 ~ 15410388 (+)
G136603 NA non-coding upstream 170412 15327455 ~ 15327739 (+)
G136581 NA non-coding upstream 198032 15299901 ~ 15300119 (+)
G136485 NA non-coding upstream 291823 15203721 ~ 15206328 (+)
G136487 NA non-coding upstream 295231 15202003 ~ 15202920 (+)
G136693 NA non-coding downstream 36282 15534671 ~ 15534893 (+)
G136695 NA non-coding downstream 43717 15542106 ~ 15542476 (+)
G136703 NA non-coding downstream 64171 15562560 ~ 15563121 (+)
G136727 NA non-coding downstream 100090 15598479 ~ 15598703 (+)
G136730 NA non-coding downstream 103883 15602272 ~ 15645250 (+)
G133542 NA other upstream 4021244 11476117 ~ 11477544 (+)
CI01000026_11241496_11246081 NA other upstream 4243078 11241496 ~ 11246204 (+)
CI01000026_11075931_11078249 MDK, MDKA other upstream 4419071 11075784 ~ 11079080 (+)
G133192 NA other upstream 5336190 10159819 ~ 10161961 (+)
G132667 NA other upstream 5928991 9568739 ~ 9569160 (+)

Expression


Co-expression Network