CI01000027_03845911_03849635


Basic Information

Item Value
gene id CI01000027_03845911_03849635
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 3845911 ~ 3849670 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_03845911_03849635.mRNA
ATGATGTTTTCCTCCTGTCCTTCCTGTCGGGTGGGAGATGAGTGTTTTGACGAGGAGCAAGGTAGTCCGGTGAGGGAGTATCAGAGATGTGACGCCCTCTGTGCAGGCGATCAATCCAACAAGTCCAGAGTATTCAGTTACTCCATGAAAGAAAAAAGAGCTGAGAGGCCAGACTCAAGTTTCATAGGCAAACAGATTTTCTGCAAATCTTCTGGACCTTCCGTCTTGCCAGAGACTGGACAAAAGCAGTCAGCTTCAGGTGAAAGACTTCCAGGACATCGAGGGCCCAGACCTCCTGTCTATTTAATGGATGTGGTAGAAAGAAACGGCACAGACCCTTCATGTGAGTCTGACCTGAAAGCCAATCCTCACCCTTCCTCACCACCAACACCCAGTCTTGCAAGTCGACCAGTGAGGGTGGACAAACAATCGTCTCTGTCTGAAAGCCCTGTTGCTGTGTCCACAAACATGCCTGCACTGGAACCAACCCATGTTCCTGTGAAGCCTGTATCTGGACAGAACAAGTCAGGTGGACATTGCTTTTTGCCAGAGACTGAAGAGAAGACATCTGTTTCAGGTGTAAGACCTCCAGGGCATCGAGGAGCCTGGTCTCCTAAGCGTTTCATGGAAGTGTCAGTGAAAAACATCATATACCCTTCATGTGAGTCTGACCTGAATGTCAGTGCTGACCCTTACTTATCCCTTCTCGCTGATCTTGCGAGTCGACGAGTGAGAGTGGACAAACGTACGTCTCTGCGCCAACACCCTGTTGCTGTGTCCACAAACATGCCTGTTTCTGTGAAGGTTTTCGCTGGACAGAAGTCTGTTTCAGATGAAAGACCTCCAGGACATCGAGGGCCCAGACTTTGTACAAATTTAATTGATGTGAGAAACATCGCAGAACCTTCATGCGAGTCTGATCTGCAAGCAATTGCTCACCTTTCCTTACCCCGCCTGCCCAGTCTCGCAAGTAGACCAGTGAAGGTAGACAAACGCATATCTCTGTGTGAACGTCCTGTTGCTGTGTCCACGAACATGTCTGTTCTGGAAATAACCTGTGTTCCTGTGAAGCCTGTTGCTGACCCACAGAAAAGAGGCAGTGTTGTTGTGGCAAGGAATCTCACGTCTTTTCAGAATCCATTTCACGATGAGGATGTCAAGATGAAGAGGGCTCAGCCACCAAAAAGAATCCATCCTCTGGTCAGAAGATTTGCCTTTGCAGGCAAGAAGCCAGACTCCACTGCTTGTACCAGTTTTAAACCCCAGACCCTGTCTCTTTAAGCTTATAAAGCATCCACACACATAACAAAAAGATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_03845911_03849635.mRNA True 1316 mRNA 0.48 2 3845911 3849670

Neighbor

gene id symbol gene type direction distance location
CI01000027_03798333_03830899 GRAMD1A coding upstream 14768 3797944 ~ 3831143 (+)
CI01000027_03783310_03784541 NA coding upstream 61370 3782922 ~ 3784541 (+)
CI01000027_03776983_03781753 NA coding upstream 64020 3776138 ~ 3781891 (+)
CI01000027_03771203_03774232 ETV2 coding upstream 71392 3769395 ~ 3774519 (+)
CI01000027_03744339_03748166 NA coding upstream 97745 3744339 ~ 3748166 (+)
CI01000027_03851507_03856447 PSMC4.L, PRS6B, PSMC4 coding downstream 1837 3851507 ~ 3856517 (+)
CI01000027_03863467_03864594 PSMC4 coding downstream 12826 3862496 ~ 3864877 (+)
CI01000027_03879680_03890591 NA coding downstream 29604 3879274 ~ 3891737 (+)
CI01000027_03907257_03920389 CEP85 coding downstream 57587 3907257 ~ 3920988 (+)
CI01000027_03941809_03967258 ATP2C1 coding downstream 92139 3941809 ~ 3967258 (+)
G139027 NA non-coding upstream 5469 3838205 ~ 3840442 (+)
G139016 NA non-coding upstream 21476 3824046 ~ 3824435 (+)
G138958 NA non-coding upstream 58061 3787355 ~ 3787850 (+)
G139002 NA non-coding upstream 101673 3744009 ~ 3744238 (+)
G138985 NA non-coding upstream 220303 3625313 ~ 3625608 (+)
G139023 NA non-coding downstream 15343 3865013 ~ 3865517 (+)
G140381 NA non-coding downstream 283168 4132838 ~ 4133069 (+)
G140384 NA non-coding downstream 290269 4139939 ~ 4140428 (+)
G140386 NA non-coding downstream 296818 4146488 ~ 4146794 (+)
G140391 NA non-coding downstream 318739 4168409 ~ 4168635 (+)
G138953 NA other upstream 325846 3502072 ~ 3520065 (+)
G138915 NA other upstream 359264 3484387 ~ 3486647 (+)
G138515 NA other upstream 2169051 1664408 ~ 1676860 (+)
G138436 NA other upstream 2338095 1506961 ~ 1507816 (+)
G138290 NA other upstream 2846730 995970 ~ 999181 (+)
G140436 NA other downstream 887728 4737398 ~ 4774262 (+)
G140440 NA other downstream 930747 4780417 ~ 4785660 (+)
CI01000027_05050310_05055447 NA other downstream 1199253 5050310 ~ 5055755 (+)
CI01000027_05069310_05070638 NA other downstream 1219682 5067917 ~ 5070868 (+)
CI01000027_05071693_05072917 NA other downstream 1222392 5071693 ~ 5073136 (+)

Expression


Co-expression Network