G139016


Basic Information

Item Value
gene id G139016
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 3824046 ~ 3824435 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU157950
ATTTTTTCTTTTGATTTTATTTTGAATTTCTTGACAGGCTTGGTGAGATTCACCTAGATGTTTTGAGTTGATTTTGTTTTTTCTCTCTCTCTCTCTGTTTTATGTTTGATTATTTCATTTGGACGGTCTGTTACTGATGTCCCCTTTCCGGCCATTTCATTTTTGTCCTGCCCTTCAGCCTCAGTGATCTCTCCCTCCTCTGAGTGTGTTATCAGAGTGTCTGTCTGTATGTCTGTCTGCGGGCGCTGCTGTGCAAAGCCCTTGAGTGATGAAAGCATGTGCTATTTATTCGGGTCAAGGAGGGAGAGAATGAAGGTGGGATGTATTGTATAGACGCGATTGTAAAGATGACTTGTGACAGTCACAAATGTATAATAAAAATGCCAAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU157950 True 390 lncRNA 0.40 1 3824046 3824435

Neighbor

gene id symbol gene type direction distance location
CI01000027_03783310_03784541 NA coding upstream 39505 3782922 ~ 3784541 (+)
CI01000027_03776983_03781753 NA coding upstream 42155 3776138 ~ 3781891 (+)
CI01000027_03771203_03774232 ETV2 coding upstream 49527 3769395 ~ 3774519 (+)
CI01000027_03744339_03748166 NA coding upstream 75880 3744339 ~ 3748166 (+)
CI01000027_03736903_03741917 NA coding upstream 81364 3736903 ~ 3742682 (+)
CI01000027_03845911_03849635 NA coding downstream 21476 3845911 ~ 3849670 (+)
CI01000027_03851507_03856447 PSMC4.L, PRS6B, PSMC4 coding downstream 27072 3851507 ~ 3856517 (+)
CI01000027_03863467_03864594 PSMC4 coding downstream 38061 3862496 ~ 3864877 (+)
CI01000027_03879680_03890591 NA coding downstream 54839 3879274 ~ 3891737 (+)
CI01000027_03907257_03920389 CEP85 coding downstream 82822 3907257 ~ 3920988 (+)
G138958 NA non-coding upstream 36196 3787355 ~ 3787850 (+)
G139002 NA non-coding upstream 79808 3744009 ~ 3744238 (+)
G138985 NA non-coding upstream 198438 3625313 ~ 3625608 (+)
CI01000027_03570192_03600805 CSPG5A non-coding upstream 224235 3570192 ~ 3600805 (+)
G138954 NA non-coding upstream 309373 3507522 ~ 3514673 (+)
G139027 NA non-coding downstream 13770 3838205 ~ 3840442 (+)
G139023 NA non-coding downstream 40578 3865013 ~ 3865517 (+)
G140381 NA non-coding downstream 308403 4132838 ~ 4133069 (+)
G140384 NA non-coding downstream 315504 4139939 ~ 4140428 (+)
G140386 NA non-coding downstream 322053 4146488 ~ 4146794 (+)
G138953 NA other upstream 303981 3502072 ~ 3520065 (+)
G138915 NA other upstream 337399 3484387 ~ 3486647 (+)
G138515 NA other upstream 2147186 1664408 ~ 1676860 (+)
G138436 NA other upstream 2316230 1506961 ~ 1507816 (+)
G138290 NA other upstream 2824865 995970 ~ 999181 (+)
G140436 NA other downstream 912963 4737398 ~ 4774262 (+)
G140440 NA other downstream 955982 4780417 ~ 4785660 (+)
CI01000027_05050310_05055447 NA other downstream 1224488 5050310 ~ 5055755 (+)
CI01000027_05069310_05070638 NA other downstream 1244917 5067917 ~ 5070868 (+)
CI01000027_05071693_05072917 NA other downstream 1247627 5071693 ~ 5073136 (+)

Expression


Co-expression Network