CI01000027_07541256_07541975


Basic Information

Item Value
gene id CI01000027_07541256_07541975
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 7541256 ~ 7542152 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_07541256_07541975.mRNA
TACACAGATCTAGAATTGGCCATCAACACCCTGGTGGTAAACTTCCACTCCGCATCTTCAACTAATGCCAACACGCTCACAGCCCAGGAGTTTCAGAGCATGCTCTCCAAAGAGCTGCCCACCATGGTGAAGACAGCAGGGGACCAGGAAGGACTCAACAAACTCCTGACAGACATGAGCGTGGAAGAGGGGAAGGGCATCATGTTTGCAGATTTTTGGAAATTGGTCGAATCTCTGGCCAATGCTCAGTTTGGACTGCAGAGCAAAGAGAAGCAGGTGAAATGTGTGAAATGTAGTCTGATGTGAGACCAGCCCTAAGCAAACAAGTCCTATCAACATTACGTAGGTGTCCACCACAGCCCTGAGAAAATCATTCACTTGTTACTCCCATCACTTTCTGTAATACTGTACGTCACTCTGCTGGTCTTTGGTATATGAGCTGAGGTCTTATCATAATTTAAGTGTTTTTATGGAGCTTTCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_07541256_07541975.mRNA True 483 mRNA 0.46 2 7541256 7542152

Neighbor

gene id symbol gene type direction distance location
CI01000027_07529488_07537870 DCST2 coding upstream 2145 7529488 ~ 7539111 (+)
CI01000027_07469157_07471720 NA coding upstream 69257 7468964 ~ 7471999 (+)
CI01000027_07455850_07459062 NMT2, NMT1 coding upstream 82194 7455850 ~ 7459062 (+)
CI01000027_07432479_07451012 FAM171A1 coding upstream 89244 7432479 ~ 7452012 (+)
CI01000027_07375781_07378401 ITGA8 coding upstream 162835 7375781 ~ 7378421 (+)
CI01000027_07545610_07559939 NA coding downstream 3458 7545610 ~ 7560158 (+)
CI01000027_07561011_07562818 NA coding downstream 18739 7560891 ~ 7563845 (+)
CI01000027_07605090_07608785 NA coding downstream 62708 7604860 ~ 7609540 (+)
CI01000027_07618538_07623119 NA coding downstream 75133 7617285 ~ 7624255 (+)
CI01000027_07634015_07663101 NPR1B, NPR1 coding downstream 91812 7633964 ~ 7663410 (+)
G141380 NA non-coding upstream 4923 7536117 ~ 7536333 (+)
G141378 NA non-coding upstream 11254 7529799 ~ 7530002 (+)
G141330 NA non-coding upstream 26377 7502066 ~ 7514879 (+)
G141364 NA non-coding upstream 39769 7501157 ~ 7501487 (+)
G141355 NA non-coding upstream 207119 7333909 ~ 7334137 (+)
G142360 NA non-coding downstream 174968 7717120 ~ 7722230 (+)
CI01000027_07789066_07797594 NA non-coding downstream 242622 7784774 ~ 7800723 (+)
G142446 NA non-coding downstream 262390 7804542 ~ 7804806 (+)
G142452 NA non-coding downstream 271508 7813660 ~ 7828067 (+)
G142465 NA non-coding downstream 288840 7830992 ~ 7907635 (+)
CI01000027_06951132_06956691 GLIPR2, GLIPR2L other upstream 583489 6951132 ~ 6957767 (+)
G141082 NA other upstream 640333 6898411 ~ 6900923 (+)
CI01000027_06706050_06708485 NA other upstream 830624 6705983 ~ 6708513 (+)
G141052 NA other upstream 1269656 6271367 ~ 6271600 (+)
CI01000027_07947743_07951397 NA other downstream 408551 7947657 ~ 7951942 (+)
CI01000027_08026500_08029412 ENSAB, ENSA other downstream 484245 8025788 ~ 8032041 (+)
CI01000027_08255251_08264629 NA other downstream 716185 8255073 ~ 8264897 (+)
G143033 NA other downstream 2186663 9728815 ~ 9729551 (+)

Expression


Co-expression Network