CI01000027_07564783_07576342


Basic Information

Item Value
gene id CI01000027_07564783_07576342
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 7564592 ~ 7576800 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_07564783_07576342.mRNA
ATCTCAAAGGACTCAACACTCAACCATCTTAAAGGTAAGAACTGATTCTGATTTGACAGTTTTTGCTGTCCACTTGCTGTCTACTAAAAGTAACACACAATTTGTAGTCACACAACTACTCTCAGAAATAGGTTAATTTGTTGTTAAATAGTTTAAATATATCACAGATAGTAATGTGTATTTTAAGTCTCAAAGAAGACTTTATTGGTGTAAAATGTAATCTTAATAAATAAATGTGTGCATTATATATCATCAATCCATAATGGCCCAAAATAACATACTGATATTTTTTATAACATAATTTGTGGAACATTTTAAATGTATTTTGCTAGCTGACATTCAAAAAGTATTTGAGAGAAGTTGATCATTTTGGTTTACTGTAATTGTCAGCATAGACAGGTGTCTAACCAGGGATCAGCTACCCATGCAGTGTATTTATTAGATAATGAAAGGAAAAAATGACCTGGAGACTTTACCAGAAAGATCACTGGTCTGTTTCAAATTCACACAAACTTTACAAGTCTAGTATTATGTCTGTTTTTGATCTTAAAATTATTTTTCTACCTATTTCACTCACTAAACAATTTAATCCAGCACAAAAGACCCATTTTATTAAGGTAAGCACTTGTTCAGTGCTGACTTCCACTAGGATCTATAAGAGTGGCCCCTCTGTGCACGCAAAGCAGACATGTCGAGAACAAGAAACAGGGAATGTGCTAAAGCGTGTGGCAAAACTGCCTTTCGTCAGCTCAGCGCTGCAGCAGGCCTCTTCCGTCTACCTGGGAGTGAAAGGTCGTTATCCACTGCTTGGGTTTGTGGGAGGTGTAGCAGAGCTGGGTGTCCGCAGTGCATCCACAGCAGCTCTGCAACAAGCAGCACCTCTGCTACAGAACCTAGAAACAGAAATTGAGGCAGTGAACAGTTTTGCACTGGTGGGTTTGGAGCAACTTGAGAAGTTTTTCCCAATCCTCCAACAGCCCACAGATGAGGTGGTTGCTAATCTGAAGGACGCTTTCTTCTCGAGGCTAGATGGTGCTCAGTCTCGAGTAAATGATGAGCTGGACAGAGCCGTGAACAGATGGGATAAACTGATAGAGCTCAGCTGGCGCCTCCTGGCGGAAGCTCAAGAATCAGCACCAGGGCGGGTGATCACCGCGGGCCTGGATGAACTCATCACTCAGTCAGAGGCGGCAGTGGCGTACTATCTACCTCTGCCACCCACGCTGCGTCGTGAGTGGGAGAGAAGAGTGCAGAGCTATGAAGATGAGGACGATGATGATGAAGAAGAAGAGCCTCGGATGTGGACGCGTATCCGTAGCCTGTTGTTGTGCCTGTACCTTCAGCTGTACCACAGACTGATGAAGCTGAGAGAAAGAGTGGACAACGTTTTGCAGATGTTGGGGGCAGCTGCCGAAACGGTGGGTCTAATGCAGTTGATGCAGATGGTGGAGTCCCTGCTGCAGCTGCTTCTGTCATTTTACACGACTCAGGTGCATCGTGTGGAGGAGCTGCGTTCTCTGCTTGTAGCTCAGCTCACATCAGGTATAAAGGCACTGAAGGTTTTGCCCCCTGTACAACAGACACTGGCTCTACCTACCCAGGTACGCACTATCATGAACGACCTACTGGAATTGGGACAGATTCTCATACAGCTGCTCATCAACACCACCCCACTCTATGACCTGATGAAACAGGTGTCTGATCTCGACACAGCAAACAACCCAACTCCAGATGAACTTCCTGAGAGTCCCTCCAGCCGTGCCTCTGCAAACAGCCTCTTCCTCAAAGCCATGGACGGTCGTCCACGTCGCCGCAGAAGCCTTTATGCCCGTTCCCCTCGTGGGTCTGCTAGCGGGCTTCCAACCAGCCCAGCTCCCTCCCCGACTCCTACCCCAATCCCAGCAAATGGCAGTAAAGGCAGTTTGAAGCTAGATTCCCAGCTCTTGGGCCCTCCAGAACTTGATACACTGGCTGTGCCCACTACCGATATGATCCGCCGCCGTTCCTCGGCCACCGAGGTCCTGCTGGCTCCCATTATGCAGTTAGTATCACAGAGCCAACGAGCGTTTGAGTTTCTGAGCTCTGGCCCTTCATCTGAAGATCAGGTCATACCTGTGGTGGAAACCACAGAACATTAGGCTCCACTTTTCTCATAAAACCTAAATGTAATCACAGATCATTCAAACACAGATCGCTGTAGCTCACAGGCTGTTATGGATAGTACAGCAAACATACCTTCAAACAACAATCCATACAATAACTCCTCTAGTAGGCCTAGAGTCATTAGCCTAGCATTTAGTATTTCCGGACAGTTTAAAGGCGAAATAAA

Function

NR:

description
perilipin 6, partial

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_07564783_07576342.mRNA True 2329 mRNA 0.46 9 7564592 7576800

Neighbor

gene id symbol gene type direction distance location
CI01000027_07520072_07528984 DCST1 coding downstream 35608 7519485 ~ 7528984 (-)
CI01000027_07495449_07517906 ADAM15 coding downstream 46686 7495449 ~ 7517906 (-)
CI01000027_07473568_07489464 ABCB1, ABCB4 coding downstream 74817 7472899 ~ 7489775 (-)
CI01000027_07462193_07463023 NA coding downstream 101377 7461930 ~ 7463215 (-)
CI01000027_07291684_07291971 NA coding downstream 272621 7290753 ~ 7291971 (-)
CI01000027_07581095_07587079 SYT11B coding upstream 3993 7580793 ~ 7587079 (-)
CI01000027_07591755_07601032 NA coding upstream 13681 7590481 ~ 7601032 (-)
CI01000027_07665461_07665871 NA coding upstream 88502 7665302 ~ 7665871 (-)
CI01000027_07690842_07692012 NA coding upstream 113838 7690638 ~ 7692012 (-)
CI01000027_07692521_07693509 NA coding upstream 115721 7692521 ~ 7693608 (-)
G142307 NA non-coding downstream 21637 7539471 ~ 7542955 (-)
G142289 NA non-coding downstream 97070 7428257 ~ 7467522 (-)
G142320 NA non-coding downstream 110988 7448773 ~ 7453604 (-)
G142254 NA non-coding downstream 179101 7360940 ~ 7385491 (-)
G142248 NA non-coding downstream 210354 7335871 ~ 7354238 (-)
G143304 NA non-coding upstream 198603 7775403 ~ 7775628 (-)
G143334 NA non-coding upstream 216908 7793708 ~ 7798644 (-)
G143341 NA non-coding upstream 227515 7804315 ~ 7804766 (-)
G143371 NA non-coding upstream 368048 7944848 ~ 7945079 (-)
G143372 NA non-coding upstream 369478 7946278 ~ 7946521 (-)
G142299 NA other downstream 124401 7439178 ~ 7440191 (-)
G142209 NA other downstream 406594 7153623 ~ 7157998 (-)
G142203 NA other downstream 421529 7141094 ~ 7143063 (-)
G141638 NA other downstream 767885 6788627 ~ 6796707 (-)
CI01000027_05447458_05450346 PON2, PON3.2, PON3.1 other downstream 2114229 5447424 ~ 5450461 (-)
G143267 NA other upstream 92529 7669329 ~ 7673769 (-)
G143325 NA other upstream 307735 7884535 ~ 7886049 (-)
G144365 NA other upstream 2961980 10538780 ~ 10542148 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location