CI01000027_07692521_07693509


Basic Information

Item Value
gene id CI01000027_07692521_07693509
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 7692521 ~ 7693608 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_07692521_07693509.mRNA
ACAAACATCCCTGTGCAGTCTGAGTGACTAATATCATACTGCTGTTTTCTGTGTCCTGATCCAGCAGTGTTCTGTGGATTGTGAAGGTGAACAGGTATAATGGAAGAGGAGTTGTGCTATTCAACAGTCATCTTCAAGCCAATCGACAATGAGAAACCTACAGAGTCTGAGGAGACTGCATTATATGCAGAGGTGAAACGAAAAGAATCAACTTTACATACAACCTCTGAGACTTCAGCTGCACAGTGTTCATTAAAAGAATCAGTTTTGCCAACAAAAGACTGTCTGACTGAAGAAAAAAGAGCTTCCACCCTAATCTCTCCGGTGTATAGACGAGCTGCAGTGTTTCTGGGGCTGCTCTGTTTCCTCCTGGTTGCTGCTGTAACAGCTGTCAGCATTTTCT

Function

NR:

description
C-type lectin domain family 9 member A-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_07692521_07693509.mRNA True 403 mRNA 0.43 4 7692521 7693608

Neighbor

gene id symbol gene type direction distance location
CI01000027_07690842_07692012 NA coding downstream 509 7690638 ~ 7692012 (-)
CI01000027_07665461_07665871 NA coding downstream 26650 7665302 ~ 7665871 (-)
CI01000027_07591755_07601032 NA coding downstream 91489 7590481 ~ 7601032 (-)
CI01000027_07581095_07587079 SYT11B coding downstream 105442 7580793 ~ 7587079 (-)
CI01000027_07564783_07576342 NA coding downstream 115721 7564592 ~ 7576800 (-)
CI01000027_07709714_07744049 MEF2D coding upstream 14949 7708557 ~ 7744049 (-)
CI01000027_07821062_07827997 RHBG coding upstream 127454 7821062 ~ 7828092 (-)
CI01000027_07850115_07861432 BCAN coding upstream 156095 7849703 ~ 7861432 (-)
CI01000027_07876459_07878548 NA coding upstream 181885 7875493 ~ 7878548 (-)
CI01000027_07888504_07893711 TLR18 coding upstream 194896 7888504 ~ 7893711 (-)
G142307 NA non-coding downstream 149566 7539471 ~ 7542955 (-)
G142289 NA non-coding downstream 224999 7428257 ~ 7467522 (-)
G142320 NA non-coding downstream 238917 7448773 ~ 7453604 (-)
G142254 NA non-coding downstream 307030 7360940 ~ 7385491 (-)
G142248 NA non-coding downstream 338283 7335871 ~ 7354238 (-)
G143304 NA non-coding upstream 81795 7775403 ~ 7775628 (-)
G143334 NA non-coding upstream 100100 7793708 ~ 7798644 (-)
G143341 NA non-coding upstream 110707 7804315 ~ 7804766 (-)
G143371 NA non-coding upstream 251240 7944848 ~ 7945079 (-)
G143372 NA non-coding upstream 252670 7946278 ~ 7946521 (-)
G143267 NA other downstream 18752 7669329 ~ 7673769 (-)
G142299 NA other downstream 252330 7439178 ~ 7440191 (-)
G142209 NA other downstream 534523 7153623 ~ 7157998 (-)
G142203 NA other downstream 549458 7141094 ~ 7143063 (-)
G141638 NA other downstream 895814 6788627 ~ 6796707 (-)
G143325 NA other upstream 190927 7884535 ~ 7886049 (-)
G144365 NA other upstream 2845172 10538780 ~ 10542148 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location