CI01000027_08555278_08567675


Basic Information

Item Value
gene id CI01000027_08555278_08567675
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 8554992 ~ 8567869 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_08555278_08567675.mRNA
GTTTATAAAGTCCGGAAGGCAGGAGACATTTGCCCCAGACTCGAGTTAAAACACTGTCTGCTGGGTTTACGTACCAGACGCATTCAGAGACAGATTGCAGAGACGGCACAGAGCCAAGATCAGACATTTACCGAAACGAAACGCGCGTGAAGCAGCTGATAAGAGCTGACAGCCAGACAAGACTGCAGGCGAAATTACATAAAACAAACTCAAAGTTAAACTGCACGCTCTAGCTTGAGTCACATGTACAGACGACAAAACGCAAAGAAGTCTAGCATAATTAGCAATGAAGGAAAAAAGTAAAACACTCACAAATCTCCATTCCCTGGAGCTGGGATCCGCATGTGACGTTCGAGCCATCCGGTGCGGTGAGGTTTCGCATGGAGTACGCGGGAGACTTCAACCGGTGCACGAGCCAGCCGGAAGTCTCTGGGGCAATGAGGTGGATTCTCTCAGCATGCTAATGCTACAGGGGCTGGTTCTGAGAGGGGAGCAAAAGAAAGCGAGGGAGGAGAGCTGTCAGTTTCCCATCTTTAATGGCCCCAGCTGCATCATTACTCTCTCAACACACTCACACACAGGGCCAAACGTACTTAGTACTGATGGTGTTGACAGCCAACGAATACAGAACCGCACGGCCCTCGCCCTGAAAAACAGCCCGGCTAATGCAGCGACGTGTGTGGGATGTGGATCAAAGGAGCTGGGGAAAAGCGCGAGCGATGCAAATCTGAGAAACACCTTCAGAGATAAATTGCTTTTCTTTATCCCGAATATTGCGAAAAGTCAAATAACGCAAATCAAAGTGAGCGCAAACAAAGCGGAGCGCTCTTCAAACTGGTTCCAAGACATCAAATACCAAACAAGTGTCTCATTCACACCATCATTATCATCTGTCATTAAAACCCTGATTAAGACCCTCCGAACTTCATTCAAGTCTCCTTTACAGTCAGACATTCCTAAGTTCAAACGCTTCATCTGGGACTTGCCCTCCCTCCAAGCGACACAGATTGCATACAGAAGACATGACGTCGGTTTGGAAAAGGCAAATGTGATCGGTTTTGTGGTAACTGTGCTCGTCGCAGTAAAAGCTAGAGTGTATGTAAGAGGCTGTCTGATGGTCCTGACCACAACCTTTCAATTATATGGCGGCTGTTTGTCTGCTGGGGAAATGAGCATTACTGCTCTAACAGCTCTGACTGAAGACACCCCTCAGAGCAGAGCGAACACAGGGGAGCATGACATGGCAAGAACAGATGACTGATTTCAACACAGCTAGAGAAGAGAGACGCAGACGGAGCTACGTGCTTTTTTCTGGATTTTTTTATTTTTTTTGTCTGCTCTGGTTTCCTCAAACTTGGAGACACAAAAGAGCTATGGTAGATCAAAGCTGACTGGCTGCCACAGTCTCACACCAGGAGCTGGACGAAATAGCGAATATTCACCATGATTTTGCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_08555278_08567675.mRNA True 1455 mRNA 0.47 9 8554992 8567869

Neighbor

gene id symbol gene type direction distance location
CI01000027_08530476_08532249 FAM210AB coding upstream 21996 8528484 ~ 8532996 (+)
CI01000027_08509097_08512799 MC2R coding upstream 41087 8509097 ~ 8514407 (+)
CI01000027_08457984_08480177 PEAR1 coding upstream 74165 8457113 ~ 8480827 (+)
CI01000027_08412094_08418277 TMEM79B coding upstream 136359 8410163 ~ 8418633 (+)
CI01000027_08389687_08404869 NA coding upstream 149705 8389522 ~ 8406117 (+)
CI01000027_08921841_08923382 SCXB coding downstream 353573 8921442 ~ 8924400 (+)
CI01000027_08990622_08995041 NDRG1B coding downstream 422631 8990500 ~ 8995662 (+)
CI01000027_09071095_09071880 NA coding downstream 503226 9071095 ~ 9071889 (+)
CI01000027_09076261_09076773 NA coding downstream 507601 9075470 ~ 9077585 (+)
CI01000027_09136426_09140323 NA coding downstream 567567 9135436 ~ 9140323 (+)
G142668 NA non-coding upstream 157208 8397526 ~ 8397784 (+)
CI01000027_08276000_08284306 NA non-coding upstream 261413 8275799 ~ 8292755 (+)
G142661 NA non-coding upstream 331597 8223184 ~ 8223395 (+)
G142720 NA non-coding downstream 38488 8606357 ~ 8606629 (+)
G142721 NA non-coding downstream 46246 8614115 ~ 8614407 (+)
G142722 NA non-coding downstream 46811 8614680 ~ 8614885 (+)
G142723 NA non-coding downstream 47290 8615159 ~ 8615509 (+)
G142724 NA non-coding downstream 48194 8616063 ~ 8616304 (+)
CI01000027_08255251_08264629 NA other upstream 294166 8255073 ~ 8264897 (+)
CI01000027_08026500_08029412 ENSAB, ENSA other upstream 522951 8025788 ~ 8032041 (+)
CI01000027_07947743_07951397 NA other upstream 603050 7947657 ~ 7951942 (+)
CI01000027_07469157_07471720 NA other upstream 1083278 7468964 ~ 7471999 (+)
CI01000027_06951132_06956691 GLIPR2, GLIPR2L other upstream 1597225 6951132 ~ 6957767 (+)
G143033 NA other downstream 1160946 9728815 ~ 9729551 (+)

Expression


Co-expression Network