CI01000027_09071095_09071880


Basic Information

Item Value
gene id CI01000027_09071095_09071880
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 9071095 ~ 9071889 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_09071095_09071880.mRNA
ATGAGCAAGTTGGAATGGATAGGACGCTTGAAAAACATGGTGAAGAAGAGTCCTTTATATTCAAATTTCATAATTGGTTTTGTGATGCTGGGACTTGAGCAACTTGTGGAGATAGACTTTGCATGCCCTTGCAACCCAAAGCTGAATCTGCTGTTCTCAATGGCGTATTTTGTAGTTCCTGCTCTCTTCTCCTTTGCACTTTTGTTTTATATTCAAAGCTCACAAATCAGCAATTATTCAAGCTGTTTGCACTGCGCTTTAGTTTGTCTTACTCCGGCCATTCTCTGGATAATGCTACTGTTTTTTGATGGACAATACTTTGCCTGTGCGAAGACTTCATGGGAAGGACTGACGGTTCACACGGATATAACTGCTTCAACAACATGGTGTCAGCCTTTAATCGAACGTGACAACAGCACAGAAAAGCAAATGACATTTTTTAGCTATCGAAATAACTCTCAGCTAGTGGGACTGTGCATACTGCTCCTGATCTCACTCCCTCTGATGTGGATTGGCATTAGGAGGTGGTACCACACACCAATAAGAACCAAAGAACTTGAAAATGAACAAATAGAAATGGAGGATTTGAGCCCATCGACCGCTCTGGACACTGTCTCTACAACTGGTGATCACAATAGAGATGAATTTTAACAGCTTTAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_09071095_09071880.mRNA True 660 mRNA 0.41 2 9071095 9071889

Neighbor

gene id symbol gene type direction distance location
CI01000027_08990622_08995041 NDRG1B coding upstream 75433 8990500 ~ 8995662 (+)
CI01000027_08921841_08923382 SCXB coding upstream 146695 8921442 ~ 8924400 (+)
CI01000027_08555278_08567675 NA coding upstream 503226 8554992 ~ 8567869 (+)
CI01000027_08530476_08532249 FAM210AB coding upstream 538099 8528484 ~ 8532996 (+)
CI01000027_08509097_08512799 MC2R coding upstream 557190 8509097 ~ 8514407 (+)
CI01000027_09076261_09076773 NA coding downstream 3581 9075470 ~ 9077585 (+)
CI01000027_09136426_09140323 NA coding downstream 63547 9135436 ~ 9140323 (+)
CI01000027_09203231_09208317 WNT4B coding downstream 131113 9203002 ~ 9208366 (+)
CI01000027_09220776_09224935 MLF2 coding downstream 148751 9220640 ~ 9225359 (+)
CI01000027_09235085_09240022 NA coding downstream 163196 9235085 ~ 9240022 (+)
G142906 NA non-coding upstream 1375 9067980 ~ 9069720 (+)
G142903 NA non-coding upstream 72128 8998682 ~ 8998967 (+)
G142870 NA non-coding upstream 73971 8996180 ~ 8997124 (+)
G142862 NA non-coding upstream 106734 8957203 ~ 8964361 (+)
G142885 NA non-coding upstream 159797 8911069 ~ 8911298 (+)
G142927 NA non-coding downstream 22540 9094429 ~ 9095960 (+)
G142923 NA non-coding downstream 24200 9096089 ~ 9099816 (+)
G142911 NA non-coding downstream 31623 9103512 ~ 9111754 (+)
G142920 NA non-coding downstream 33345 9105234 ~ 9121557 (+)
G142940 NA non-coding downstream 37363 9109252 ~ 9123257 (+)
CI01000027_08255251_08264629 NA other upstream 810269 8255073 ~ 8264897 (+)
CI01000027_08026500_08029412 ENSAB, ENSA other upstream 1039054 8025788 ~ 8032041 (+)
CI01000027_07947743_07951397 NA other upstream 1119153 7947657 ~ 7951942 (+)
CI01000027_07469157_07471720 NA other upstream 1599381 7468964 ~ 7471999 (+)
CI01000027_06951132_06956691 GLIPR2, GLIPR2L other upstream 2113328 6951132 ~ 6957767 (+)
G143033 NA other downstream 656926 9728815 ~ 9729551 (+)

Expression


Co-expression Network