G142903


Basic Information

Item Value
gene id G142903
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 8998682 ~ 8998967 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU162357
CATGGTACGGCAGCAAAGTTCCTTGATTATTACGCCGGAATGAGAGTATAGTTCCTAGCCATATCGGCCTAGAAAATCACAACTTTTCATTTTCCGTCGGTCTTAGTACATGATGTAACTACAGAAGAGTCAAGTTTTAAATAGGAAAAATATTGAAACTCTTTGGTCATTTTTGAGCGAGATGCTAACGGTCTAATCAGATTCAATGAACTATGCTAAGCTATGCTAAAAGTGGTACCGCCAGACCCGGAGATCGGCTGAATGGATTCGAAAACGGTAAAACTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU162357 True 286 lncRNA 0.40 1 8998682 8998967

Neighbor

gene id symbol gene type direction distance location
CI01000027_08990622_08995041 NDRG1B coding upstream 3020 8990500 ~ 8995662 (+)
CI01000027_08921841_08923382 SCXB coding upstream 74282 8921442 ~ 8924400 (+)
CI01000027_08555278_08567675 NA coding upstream 430813 8554992 ~ 8567869 (+)
CI01000027_08530476_08532249 FAM210AB coding upstream 465686 8528484 ~ 8532996 (+)
CI01000027_08509097_08512799 MC2R coding upstream 484777 8509097 ~ 8514407 (+)
CI01000027_09071095_09071880 NA coding downstream 72128 9071095 ~ 9071889 (+)
CI01000027_09076261_09076773 NA coding downstream 76503 9075470 ~ 9077585 (+)
CI01000027_09136426_09140323 NA coding downstream 136469 9135436 ~ 9140323 (+)
CI01000027_09203231_09208317 WNT4B coding downstream 204035 9203002 ~ 9208366 (+)
CI01000027_09220776_09224935 MLF2 coding downstream 221673 9220640 ~ 9225359 (+)
G142870 NA non-coding upstream 1558 8996180 ~ 8997124 (+)
G142862 NA non-coding upstream 34321 8957203 ~ 8964361 (+)
G142885 NA non-coding upstream 87384 8911069 ~ 8911298 (+)
G142849 NA non-coding upstream 124086 8870743 ~ 8874596 (+)
G142848 NA non-coding upstream 134182 8860743 ~ 8864500 (+)
G142906 NA non-coding downstream 69013 9067980 ~ 9069720 (+)
G142927 NA non-coding downstream 95462 9094429 ~ 9095960 (+)
G142923 NA non-coding downstream 97122 9096089 ~ 9099816 (+)
G142911 NA non-coding downstream 104545 9103512 ~ 9111754 (+)
G142920 NA non-coding downstream 106267 9105234 ~ 9121557 (+)
CI01000027_08255251_08264629 NA other upstream 737856 8255073 ~ 8264897 (+)
CI01000027_08026500_08029412 ENSAB, ENSA other upstream 966641 8025788 ~ 8032041 (+)
CI01000027_07947743_07951397 NA other upstream 1046740 7947657 ~ 7951942 (+)
CI01000027_07469157_07471720 NA other upstream 1526968 7468964 ~ 7471999 (+)
CI01000027_06951132_06956691 GLIPR2, GLIPR2L other upstream 2040915 6951132 ~ 6957767 (+)
G143033 NA other downstream 729848 9728815 ~ 9729551 (+)

Expression


Co-expression Network