CI01000027_09484034_09501412 (KLHL32)


Basic Information

Item Value
gene id CI01000027_09484034_09501412
gene name KLHL32
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 9484034 ~ 9502255 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_09484034_09501412.mRNA
GAGCATGCCCTCTGAGCCTCCTCCCAGCTCTCAGGACATGCTGACAGGACAGAGGCTGTGTCAATCCAAATCCCACCAGGACTCTGTCCTCTCTGCCCTTAATCAGCAGCGCAAGGATGGACTGCTCTGCGATGTCACCTTGGTCGCCGGGGAACAGAAGTTCCACGCTCACAAGGCGGTCCTGGCAGCCTGCAGCGATTACTTCCGGGCCATGTTCAGTCTGTGTATGGTGGAGAGTGAGGCAGATGAGGTAACTCTCCAGGGTGTGACGAGCGTCGGACTGAAGCACGCACTGGACTTCGCCTACACAGGCCAGATCATGCTGGAGCCAGGAGTGATACAAGACGTCCTGTCTGCTGGAAGCCACCTTCAGCTGCTGGAACTGCTCAGCCTCTGTTCCCACTATCTCATTCAGGAGCTGAACAGTTTTAACTACCTGGACCTGTACAGGCTGGCAGACCTCTTCCACTTGCCGGCCCTGGAGGAAGCAGTGGTGGGCTTTCTGGTGGATCACCTCTCTGAGCTGCAGAAGAACAGACAAGAGGAAGTGCTGCTCCTACCTTATCGGCTCCTCAGGGAAGTACTAAAAAGCGACCGGCTCACCTCTCTCAGTGAGGAGGAGATATGGCAGTTATTGGTGCGTTGGCTGGAGCACGACTGCAGATACCAGTACATGGAGGAACTACTGCAACACGTGCGCTACGGCCTGATGGAGGTCTCCGCCCTGCACCGTGTGGCCAGCAGCCACCCCTTCCTCAATTCCAGCAGCACTGTCGCCGCCCTAGTGGAGGAGGCATTGGACTACCACCGCTCTGTATTTGCACAGCCTTTACGTCAGACGGCCCGCACAACGCCTCGCTTTCAGTCACTAACTTTATATATCATCGGCGGGCGCAAACGGGAGGTCAGCCGCGTACGGGAGCTGCGGTTCTTCAACCCTGCTGCGCAGGAGCACACGCGTGTTGCCGGGGGTTCGAACTGGAGTGAATTAGCACCCATGCCTGCTGGACGAAGTCACCACTGTGTGGCTGTCATGGGCAACTTCCTGTTCGTGGCTGGCGGGGAGGTGGAACACGCCACTGGAAGGACATGTGCGGTGAGGACGGCGTGCCGGTACGATCCGAGGGTAAACCGCTGGACTGATATTGCACCGATGAAGGCGTGCAGGGAGCACTTTGTGCTGGGAGCTCTGGGACAGTATCTCTATGCCGTCGGGGGGAGGAACGAACTAAGGCAGGTTCTGCCCAGTGTGGAGCGCTACTGCCCCAAAAGGAACAAGTGGACCTATGTGCAACCTTTCGACCGTTCGCTGTCCTGTCATGCAGGATGTGTGGCTGACGGGTTGCTCTGGGTATCAGGTGGTGTCACTAACACAGCTCAGTACCAGAATCGACTGATGGTGTATGACCCAGGACAGAATCAGTGGATAGCGCGCAGTCCCATGTTGCAGAGGAGGGTGTACCATGTGATGGCGGCAGTCAAAAGGCAGCTATATGTGCTTGGGGGGAACGATCTAGACTACAACAATGACCGCATCCTAGTTAGACACATCGACTCTTATGACATGGACATGGACCAGTGGACACGCTGCACCTTCAGTCTTCTCACAGGCCAAAATGAGGCAGGAGTGTCTGTCCATGATGACAGAATCTATGTGGTTGGTGGATATTCCATCTGGACAAATGAACCCCTTGCATGCATTCAGGTGCTAGATGTGAGCACCAAAGGTAAAGAGGAGGTTTTTTATGGGCCAACGCTCCCATTCGCTTCAAATGGAGTGGCGACGTGTTTCTTGCCTGCACCGTACTTCACCTGCCCCAACCTGCAGACCCTACAAGTGCCACATCACAGGATAGGGGCTCTCTAACCTCTCCACTCATTACTCATTGAGGATATTCCCACAAACACACTATGAACCAGTGGAATCATGTAAGAGCCTATTCTACTCCCACAAATTGTGACTGGTGGATGGAGTGGAGTCATTGTTGATCATACATTGATCATGTAGAGCCAGCATGAAGTGTTCTGATGGATGTGGAAACATTCAAAAAGAAGTTCAAGAGTTTTTGTCAAGCTTGACTGGCGTTCATGCATTTCTGAACTGGATATGCGATGGTGCTGCACCGTGCTAATCCAGTTTAACAAGCAGTGTGTAAATCTGTCTGAATGATTAAGAGACACTTTATGGCCCAGGCCCAAATGGCACACTTGATGTGAACCTGTGGCCTATCAAGTCTAAAAGACTGTCCCATTTGTCATTTTAACATTCAAAAGGGCGTTCATACCTCACAGTCAACTTTTACTCAACAATCCATGCAGAATTACATCTAAGGAAAAATGCAAGGGCATTTTGGAAAGGGTCGGAAGTGCAAGGGACCGGTTTTCTTAGATTCTTAGGATTCAATCCACTTTCCACTCTGACCTTAATGTTCTGCACCGCTATAATGTTGGACTCAGCTGAACGTCAGTTGAAGTTCCTGTTCATTCCATGTCATTTCTCAGCATGTGACAAACTGTACTTTCTATCAAAACTCAGGATGATGTATTGTTTACTGAATGTGTATGACCACAGCTGACGACAAATACACACACAGCATCTTCACAATCTGCGTCAACAGTGGCATCTTGACTGTTCTCCATCCTACCACCAAAAACTGCCCATTCCATAAGAAAACATGTAAGGGCACACTTTTTTTACATAATGTCTATA

Function

symbol description
klhl32 Orthologous to human KLHL32 (kelch like family member 32).

GO:      GO:0042787, GO:0031463, GO:0004842

KEGG:

id description
K10468 KLHL32; kelch-like protein 32

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_09484034_09501412.mRNA True 2710 mRNA 0.51 10 9484034 9502255

Neighbor

gene id symbol gene type direction distance location
CI01000027_09459448_09462994 NA coding upstream 20934 9459448 ~ 9463100 (+)
CI01000027_09448387_09455263 NA coding upstream 28741 9447047 ~ 9455293 (+)
CI01000027_09424746_09432978 NA coding upstream 50563 9424746 ~ 9433471 (+)
CI01000027_09414743_09422093 SPHK2 coding upstream 61555 9412872 ~ 9422479 (+)
CI01000027_09398846_09400911 NA coding upstream 82793 9398846 ~ 9401795 (+)
CI01000027_09562530_09572606 NA coding downstream 60241 9562496 ~ 9572635 (+)
CI01000027_09661837_09663114 POU3F2B, POU3F2 coding downstream 159268 9661523 ~ 9663857 (+)
CI01000027_09767653_09768743 NA coding downstream 265398 9767653 ~ 9769402 (+)
CI01000027_09774092_09779035 NA coding downstream 271737 9773992 ~ 9779129 (+)
CI01000027_09783491_09789725 PRDM13 coding downstream 281236 9783491 ~ 9790186 (+)
G143066 NA non-coding upstream 5848 9476391 ~ 9478186 (+)
G143061 NA non-coding upstream 8424 9475009 ~ 9475610 (+)
G143064 NA non-coding upstream 9344 9474181 ~ 9474690 (+)
G143062 NA non-coding upstream 11095 9471169 ~ 9472939 (+)
G143060 NA non-coding upstream 15992 9467823 ~ 9468042 (+)
G143075 NA non-coding downstream 55867 9558122 ~ 9558380 (+)
G143093 NA non-coding downstream 90490 9592745 ~ 9593407 (+)
G143110 NA non-coding downstream 180271 9682526 ~ 9682767 (+)
G143034 NA non-coding downstream 198749 9701004 ~ 9710260 (+)
G143156 NA non-coding downstream 362376 9864631 ~ 9865105 (+)
CI01000027_08255251_08264629 NA other upstream 1223208 8255073 ~ 8264897 (+)
CI01000027_08026500_08029412 ENSAB, ENSA other upstream 1451993 8025788 ~ 8032041 (+)
CI01000027_07947743_07951397 NA other upstream 1532092 7947657 ~ 7951942 (+)
CI01000027_07469157_07471720 NA other upstream 2012320 7468964 ~ 7471999 (+)
CI01000027_06951132_06956691 GLIPR2, GLIPR2L other upstream 2526267 6951132 ~ 6957767 (+)
G143033 NA other downstream 226560 9728815 ~ 9729551 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location