G143045


Basic Information

Item Value
gene id G143045
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 9305954 ~ 9306160 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU162520
AAATTTGCATGTGTCACAACCTGTCATATGATCTCTATTCCTTATTAGTCATAACATTTAAAGTCTTTTAAAATGTTAACACTTCACTTTTGTTCAGTAAATCATGTTAATATATGGTAACCATTTGTATGTTTTTGTAATTATATCTGAAGCGTTTATGTAGGTTGACTACATCTATTTTCTTACACAACACATCATTTTGCCCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU162520 True 207 lncRNA 0.29 1 9305954 9306160

Neighbor

gene id symbol gene type direction distance location
CI01000027_09294505_09295818 RPS9.L, BRAFLDRAFT_126921, RPS9 coding upstream 10069 9294002 ~ 9295885 (+)
CI01000027_09243269_09246171 NA coding upstream 59039 9243148 ~ 9246915 (+)
CI01000027_09235085_09240022 NA coding upstream 65932 9235085 ~ 9240022 (+)
CI01000027_09220776_09224935 MLF2 coding upstream 80595 9220640 ~ 9225359 (+)
CI01000027_09203231_09208317 WNT4B coding upstream 97588 9203002 ~ 9208366 (+)
CI01000027_09308025_09316510 PHC1 coding downstream 1772 9307932 ~ 9316668 (+)
CI01000027_09349353_09352981 MBOAT7 coding downstream 43193 9349353 ~ 9353150 (+)
CI01000027_09354981_09368973 TMC4 coding downstream 48821 9354981 ~ 9369462 (+)
CI01000027_09369991_09372314 NA coding downstream 63831 9369991 ~ 9373307 (+)
CI01000027_09376781_09390767 LMTK3 coding downstream 70621 9376781 ~ 9391123 (+)
G143040 NA non-coding upstream 13308 9292221 ~ 9292646 (+)
G143039 NA non-coding upstream 14434 9291243 ~ 9291520 (+)
G143038 NA non-coding upstream 15311 9290413 ~ 9290643 (+)
G143037 NA non-coding upstream 16075 9289638 ~ 9289879 (+)
G142941 NA non-coding upstream 22897 9282424 ~ 9283057 (+)
CI01000027_09398846_09400911 NA non-coding downstream 7688 9398846 ~ 9401795 (+)
G143050 NA non-coding downstream 26541 9332701 ~ 9333879 (+)
G143009 NA non-coding downstream 98584 9404744 ~ 9406029 (+)
G143031 NA non-coding downstream 116762 9422922 ~ 9423148 (+)
G143004 NA non-coding downstream 117251 9423411 ~ 9424600 (+)
CI01000027_08255251_08264629 NA other upstream 1045128 8255073 ~ 8264897 (+)
CI01000027_08026500_08029412 ENSAB, ENSA other upstream 1273913 8025788 ~ 8032041 (+)
CI01000027_07947743_07951397 NA other upstream 1354012 7947657 ~ 7951942 (+)
CI01000027_07469157_07471720 NA other upstream 1834240 7468964 ~ 7471999 (+)
CI01000027_06951132_06956691 GLIPR2, GLIPR2L other upstream 2348187 6951132 ~ 6957767 (+)
G143033 NA other downstream 422655 9728815 ~ 9729551 (+)

Expression


Co-expression Network