CI01000028_04224432_04233899


Basic Information

Item Value
gene id CI01000028_04224432_04233899
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000028
NCBI id null
chromosome length 9874160
location 4224226 ~ 4234212 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000028_04224432_04233899.mRNA
CTATTTAAACATCTCTAATTATTATTGTAATCAGGTTTAGCCTTATCACACCTTATCTTGTTATTTCTCCTTCTTTCAACATAGAAAGCCCAGCAGAAAGGAGACACTGAAAAACAGATTTTCCACTACAATAATTTAGTCTTGGAGAGTAAGTAACTAAATGTGTTGCTACTAACTTACCTACATTACTAAACATTGGAACGACCATGACTGTGTTTATTTATGCGGATGCTAATGTGCTAACGGCTAACAGCAGGAGAGGATGGGTATGTACGTCTGTTGGCCAATCCCATGCTGGAATCCCAGGCATGGCACTGTGGTGGCACAGTTCTAGTGCCCCGATGACTGCCGCATACTCCACACCCCTGACCCCTATTTCCCTGTTGACATGTGAAACACAAAGTTCTAGGATGGTTATGGATGTGTGGGTGCATTTGGGCAGAATTTTTCCCTCTTTAAATAAAGAAGTGACATGGAGCTGTGCAGCCATGCCTGAAACTGGTGAATCAATATCAGACTACATTAGTTACTCTGGCATCAGAGCCTGCCAGGCCAGCACAGGATCAATGCCAAAACAGCAAGCCATCTCTCGGTTTATCTTTCACTCTGCAACTCTGTCTATATCTCTCTACCTGTCCAGCCAATCAGAACAATTTCAGCATGAATGGAAAGTTTACTCTATCTCCGAGCAATCTCGCAGCTGTTGCAAGCTCCTGCAAAGGCGTGCCAGCCTTGCCACGTTCTCCGCACACAAAACCCTCCCTCTCTCCCAGGTGCAGGCAGGCGAACAATGGACAACCGCTTATGCAGTTCACAAGAAGCCAGGGCAGAGACGTGTTGCTCGGCATAAGCTGCGTCCCTCTGGCACAGACACCACAGTTGCCATTACTGTGGGAGTCGGTCACGTGGAGGTTTCGGTTCTCACGCGGACCCTTTCAGGGGCAATGCGTGTGGAGCTGAATGAGCGCAGAACACTGGTTTTACAGTGTTTGAGTGGGCTGCTTTTGCCAGAGGCGGCGGTACAAAACTACAGGGACCGCAGAGCTGCGGCGGTGAAAATGTACCGACCTTCAATAAGTCGGCTGATTCAAGCATTTCGACTCGAAACAGAACAGGATTTTCAGGGGTTTGAAGCAGAAAATTGCAGCTGCGCTTTGCAGATAAAACAAGAACTCCATTTGGACGGATGGGAGGGAGAGTCAGCTGTGCAGTGGAGAAACACTCTGCTGTCACATCCACTCCATTATTTAGATCAGGAGCTCTCACTCATGTTTAATTCACCATCGAGCGGCTACGCCGCATCTAGACAGAGCCGCACAGCACCACCTAAATGTGCACTACAGACTCAGCCAAAAAACACAGTGGTGGAAGTCCTACAAATGTGACAAATTAAGAATTTGCATTAAAAAAGGAAACCGCTTTTTTAAGTAAAACCATTTATGTAGCACCAAGAGACTTCTCAGGGAGAATTCTGGGTAGACAAAAAGTCATTGTTGTATATTTGCAAATGCAAAACATGCAAATCCCATACTAATGCATGAGACATGCAGCTTGAAATTCCCCATCTTGCAGGCCGGTTGTGAGTGGAGAATGCTGCAGACTACTATAATCTGGCGTACTTTACTGCAACGGTATGGAATCGCTCAATTTGGGTCTCTTGATAGTGGATAAATGTTAAAACTTCCTAGAACTTACTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000028_04224432_04233899.mRNA False 1698 mRNA 0.46 6 4224226 4234212

Neighbor

gene id symbol gene type direction distance location
CI01000028_04216684_04219734 NA coding upstream 4449 4215386 ~ 4219777 (+)
CI01000028_04145294_04156879 NA coding upstream 65573 4144943 ~ 4158653 (+)
CI01000028_03946366_03958585 NA coding upstream 264403 3944521 ~ 3959823 (+)
CI01000028_03689833_03704593 TREH coding upstream 519487 3689521 ~ 3704739 (+)
CI01000028_03677140_03686568 DDX6 coding upstream 537250 3674444 ~ 3686976 (+)
CI01000028_04240962_04247433 NA coding downstream 5910 4240122 ~ 4248422 (+)
CI01000028_04441930_04444388 TTC36 coding downstream 207654 4441866 ~ 4444480 (+)
CI01000028_04729544_04888382 CNTN5 coding downstream 495332 4729544 ~ 4888382 (+)
CI01000028_05039088_05063207 NA coding downstream 804876 5039088 ~ 5063207 (+)
CI01000028_05114584_05116494 RNF7, RBX2 coding downstream 879306 5113518 ~ 5117062 (+)
G146864 NA non-coding upstream 97893 4126002 ~ 4126333 (+)
G146863 NA non-coding upstream 100034 4123939 ~ 4124192 (+)
G146862 NA non-coding upstream 100451 4123552 ~ 4123775 (+)
G146860 NA non-coding upstream 103500 4120457 ~ 4120726 (+)
G146854 NA non-coding upstream 123984 4099900 ~ 4100242 (+)
G146927 NA non-coding downstream 22968 4257180 ~ 4257652 (+)
G146931 NA non-coding downstream 36264 4270476 ~ 4270740 (+)
G147327 NA non-coding downstream 82563 4316775 ~ 4317277 (+)
G147343 NA non-coding downstream 130000 4364212 ~ 4364594 (+)
G147350 NA non-coding downstream 157376 4391588 ~ 4391916 (+)
G145843 NA other upstream 1200006 3023146 ~ 3024220 (+)
CI01000028_00525538_00533862 NA other upstream 3702295 524647 ~ 535245 (+)
G147462 NA other downstream 724491 4958703 ~ 4989838 (+)
G147636 NA other downstream 981878 5216090 ~ 5216611 (+)
G147693 NA other downstream 1206242 5440454 ~ 5453610 (+)
CI01000028_07470324_07471346 NA other downstream 3235680 7469543 ~ 7471432 (+)
CI01000028_08302370_08504940 SPON1, SPON1A other downstream 4068035 8302247 ~ 8504940 (+)
CI01000028_03650532_03667920 BCL9L coding upstream 528191 3648405 ~ 3668011 (+)

Expression


Co-expression Network