G145408


Basic Information

Item Value
gene id G145408
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000028
NCBI id null
chromosome length 9874160
location 1797190 ~ 1797468 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU165221
CTTCATTTTATGAAGCGAAGAGAATACTTTTTGTGCGCATAAACAAAACAAAAATAACAACTTTATTCAACAATATCTTCTCTTCTGTGTCATTCTCATACGTTGTTTACATCCAGCGCTTCCAGGTTCTACGTCAGAATGCCGACTCATTATTGGCCGGCTCCTGTGTCATGCGTCGTGTTGCTCACGTGATCAGCTTTGGCCAATACTGAGCCAGCGTTCATGTGTAAACACGGAAGCCTGCTCTGTGCTTATTGCGTCACCTGCATAAGGATAATG

Function

NR:

description
PREDICTED: glucocorticoid receptor-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU165221 True 279 lncRNA 0.43 1 1797190 1797468

Neighbor

gene id symbol gene type direction distance location
CI01000028_01756600_01766746 NA coding upstream 30444 1756600 ~ 1766746 (+)
CI01000028_01716012_01751372 GRAMD1BB, GRAMD1B coding upstream 45157 1715085 ~ 1752033 (+)
CI01000028_01658857_01673939 NA coding upstream 123123 1658696 ~ 1674067 (+)
CI01000028_01558674_01575492 CLMP, CLMPB coding upstream 221584 1558674 ~ 1575606 (+)
CI01000028_01507427_01522135 NA coding upstream 273961 1496380 ~ 1528547 (+)
CI01000028_01807411_01830472 DNER coding downstream 9943 1807411 ~ 1830740 (+)
CI01000028_01854902_01867810 PID1 coding downstream 57434 1854902 ~ 1868500 (+)
CI01000028_01991288_02032906 SPHKAP coding downstream 193769 1991237 ~ 2034191 (+)
CI01000028_02049119_02056683 SLC19A3B, SLC19A3 coding downstream 251651 2049119 ~ 2057082 (+)
CI01000028_02058075_02059853 IRF2BP1 coding downstream 260433 2057901 ~ 2061028 (+)
G145353 NA non-coding upstream 105747 1610867 ~ 1691443 (+)
G145352 NA non-coding upstream 209467 1577988 ~ 1587723 (+)
G145358 NA non-coding upstream 219290 1577632 ~ 1577900 (+)
G145368 NA non-coding upstream 345857 1451126 ~ 1451333 (+)
G145418 NA non-coding downstream 40925 1838393 ~ 1838610 (+)
G145420 NA non-coding downstream 83598 1881066 ~ 1881652 (+)
G145444 NA non-coding downstream 118108 1915576 ~ 1916173 (+)
G145487 NA non-coding downstream 283459 2080927 ~ 2081191 (+)
G145488 NA non-coding downstream 284292 2081760 ~ 2082130 (+)
CI01000028_00525538_00533862 NA other upstream 1275259 524647 ~ 535245 (+)
G145843 NA other downstream 1225678 3023146 ~ 3024220 (+)
G147462 NA other downstream 3161235 4958703 ~ 4989838 (+)
G147636 NA other downstream 3418622 5216090 ~ 5216611 (+)
G147693 NA other downstream 3642986 5440454 ~ 5453610 (+)
CI01000028_07470324_07471346 NA other downstream 5672424 7469543 ~ 7471432 (+)

Expression


Co-expression Network