CI01000029_01526863_01527414


Basic Information

Item Value
gene id CI01000029_01526863_01527414
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 1526754 ~ 1527899 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_01526863_01527414.mRNA
CTATATAAAGCAGATAACATCAGTGAGATTATTATCTTCGAGACGATCAGCCACTGATAAAGCAACCAGCAAATCAAGATCTGATCATCGACCGACCACAGACCCAAACATGAGGCCACACTGCATCTTCATCGCCTGTCTTGTGCTCTTCGCTTTCTGCTCACTGGCTCAGAGTGAATTCAGCCAAGGTCCCGATAAGTGCTGCTTTTCTTTTTCCAATGTAAAAATCCCAGTAAAGCAGGTTGAGAGTTATCATATCACACATCTTGAGTGCCACAGGAGTGGAATCATTTTCATCACAAAAGCTCAGAAGGAGATCTGTGCTGACCTGACAGAGAGATGGGTTCAGAGACTGAAGAATTTGGTGGACGCTCGCAGCATGAAAGACAACGCGTCAGAGAGCAGCTCTGGGGACAGCTTCTAAGATGTGAATGCGCTTCTCTTTTCAAACTATTGCATTGAACAGTTTCTAAACTGTTTTCACATTTTAAAACTGTTAATCAATTATGAAGATTGTGATATATATTCAAAGCATATTTAAGCTAAAATTTTAATATGAATCTGTTTGAATTTTAACATTACTATACAA
>TU172657
TATCTTCGAGACGATCAGCCACTGATAAAGCAACCAGCAAATCAAGATCTGATCATCGACCGACCACAGACCCAAACATGAGGCCACACTGCATCTTCATCGCCTGTCTTGTGCTCTTCGCTTTCTGCTCACTGGCTCAGAGTGAATTCAGCCAAGGTCCCGATAAGTGCTGCTTTTCTTTTTCCAATGTAAAAATCCCAGTAAAGCAGGTTGAGAGTTATCATATCACACATCTTGAGTGCCACAGGAGTGGAATCATTTTCATCACAAAAGCTCAGAAGGAGATCTGTGCTGACCTGACAGAGAGATGGGTTCAGAGACTGAAGAATTTGGTGGACGCTCGCAGCATGAAAGACAACGCGTCAGAGAGCAGCTCTGGGGACAGCTTCTAAGATGTGAATGCGCTTCTCTTTTCAAACTATTGCATTGAACAGTTTCTAAACTGTTTTCACATTTTAAAACTGTTAATCAATTATGAAGATTGTGATATATATTCAAAGCATATTTAAGCTAAAATTTTAATATGAATCTGTTTGAATTTTAACATTACTATACAAATAAAGAATACTGAGAAACACTGGATTTTGTTCATTTTTTATTTATTTATTTATTTTTTTTTTTTAAATGAAGAAAAAAACAAACAAATATATTTGTACAAATATTATACTGATAAAAATATTAAATTAAACAATAGTTTAACAGTATCAATAATAATACCAGTAATGTGAATACTGATAGTAGTGATAATGTGTAATAGTCTGTATTGTAATATTTACTTTAATAATAATAATAATTCCTTAAATTTATATAGCGCTTTTCTGGATACTTTACATATGGAAGGGGGAATCTCCTCAACCACCAGCAATGTGCAGCATCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_01526863_01527414.mRNA False 589 mRNA 0.40 3 1526754 1527579
TU172657 True 877 TUCP 0.34 3 1526786 1527899

Neighbor

gene id symbol gene type direction distance location
CI01000029_01475527_01497973 EHD3 coding upstream 28686 1474930 ~ 1498068 (+)
CI01000029_01396098_01435688 GALNT14 coding upstream 90676 1395443 ~ 1436078 (+)
CI01000029_01318644_01336634 NA coding upstream 189833 1317774 ~ 1336921 (+)
CI01000029_01304740_01313262 FLVCR1 coding upstream 213489 1302326 ~ 1313265 (+)
CI01000029_01297680_01300190 TATDN3 coding upstream 226508 1297611 ~ 1300246 (+)
CI01000029_01533005_01534392 NA coding downstream 4896 1532475 ~ 1534556 (+)
CI01000029_01542500_01557216 C1ORF95, STUM coding downstream 14571 1542150 ~ 1558713 (+)
CI01000029_01616562_01644867 ADCK3, COQ8A coding downstream 88856 1616435 ~ 1644880 (+)
CI01000029_01653157_01657944 NA coding downstream 125261 1652840 ~ 1658005 (+)
CI01000029_01662550_01681291 NA coding downstream 134971 1662550 ~ 1682090 (+)
G152034 NA non-coding upstream 1554 1524996 ~ 1525200 (+)
G152002 NA non-coding upstream 53289 1473029 ~ 1473465 (+)
G151997 NA non-coding upstream 61266 1465211 ~ 1465488 (+)
G151996 NA non-coding upstream 64441 1462004 ~ 1462313 (+)
G151991 NA non-coding upstream 70337 1456207 ~ 1456417 (+)
G152018 NA non-coding downstream 131029 1658608 ~ 1658858 (+)
G152021 NA non-coding downstream 131415 1658994 ~ 1659667 (+)
G152025 NA non-coding downstream 132968 1660547 ~ 1660811 (+)
G152023 NA non-coding downstream 156399 1683978 ~ 1684291 (+)
G152071 NA non-coding downstream 163606 1691185 ~ 1691392 (+)
G151495 NA other upstream 1154832 366541 ~ 371922 (+)
G151415 NA other upstream 1301509 170521 ~ 225245 (+)
G152451 NA other downstream 1234015 2761594 ~ 2762939 (+)
G153475 NA other downstream 2017546 3545125 ~ 3562004 (+)
G153790 NA other downstream 3206010 4733589 ~ 4740107 (+)
G154587 NA other downstream 3743441 5271020 ~ 5271535 (+)
CI01000029_05461497_05468985 BATF other downstream 3929662 5461497 ~ 5470346 (+)
CI01000029_01699880_01719696 UCKL1.L, UCKL1 coding downstream 123226 1699666 ~ 1721489 (+)
CI01000029_01751220_01751657 NA coding downstream 174531 1750971 ~ 1752636 (+)

Expression


Co-expression Network