CI01000029_02254888_02257580


Basic Information

Item Value
gene id CI01000029_02254888_02257580
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 2254877 ~ 2257580 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_02254888_02257580.mRNA
GTCAAAGTAAAAGGATAACTGCCTTATCAACCAATCAAAATGATGAACTGATGTTTGAACTTGTCTTTCTACAGCGCTGCCGGCAGGCGCGAGAGAGCCCTCGTGTGGCCGAACCCCCTCAGCAGACTCTCGTCTTGTTGCAGCCATTAGCAGTGCAAATTGGAGGAGCAGATTGCGTCGATGTCTGCGGACAGATCTGCAATAAGAAAGACTTGGAATTGTGCAATGGACCGAATGGATATAGTATGCCTTTTTCTTCTTGTCAATGTGCTGGGGTTGGGTCTTGCCTGAGTCTTGCTGTTGTTTGGCCAGTGCTTCTTGCGATAATCGCTGCTGACTTTTGGAGTCGTGCGAGAGGTCCCGGGTTAAGATCCCGGACAAGCCCCCATATGTCACACCTGGCTCAATGGTGCGGAAGGGAAGGCGACACAGCAGAGTAAACTCAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_02254888_02257580.mRNA True 451 mRNA 0.50 4 2254877 2257580

Neighbor

gene id symbol gene type direction distance location
CI01000029_02231187_02248416 NA coding downstream 5386 2231187 ~ 2249491 (-)
CI01000029_02203122_02221481 TPD52L1 coding downstream 33396 2202780 ~ 2221481 (-)
CI01000029_02159023_02164894 NA coding downstream 89749 2158837 ~ 2165128 (-)
CI01000029_02145528_02148347 HEY2 coding downstream 105769 2144450 ~ 2149108 (-)
CI01000029_02125408_02143865 PEX7 coding downstream 111012 2125322 ~ 2143865 (-)
CI01000029_02359382_02359992 NA coding upstream 101433 2359013 ~ 2359992 (-)
CI01000029_02502175_02516608 CLVS2 coding upstream 244576 2502156 ~ 2517380 (-)
CI01000029_02532272_02537205 SMPDL3A coding upstream 274620 2532200 ~ 2537205 (-)
CI01000029_02539755_02540836 FABP7B, FABP7 coding upstream 282149 2539729 ~ 2542444 (-)
CI01000029_02589994_02592379 NA coding upstream 330870 2587549 ~ 2592379 (-)
G153134 NA non-coding downstream 27314 2225717 ~ 2227563 (-)
G152762 NA non-coding downstream 140568 2113424 ~ 2114309 (-)
G153105 NA non-coding downstream 158795 2095835 ~ 2096082 (-)
G153102 NA non-coding downstream 174593 2080072 ~ 2080284 (-)
G153085 NA non-coding downstream 317313 1934941 ~ 1937564 (-)
G153161 NA non-coding upstream 186083 2443663 ~ 2444082 (-)
G153162 NA non-coding upstream 187571 2445151 ~ 2445890 (-)
G153163 NA non-coding upstream 189550 2447130 ~ 2447590 (-)
G153164 NA non-coding upstream 190035 2447615 ~ 2447842 (-)
G153165 NA non-coding upstream 190957 2448537 ~ 2448867 (-)
CI01000029_01293143_01293964 BATF3 other downstream 960754 1292249 ~ 1294123 (-)
G153891 NA other upstream 991197 3248777 ~ 3286554 (-)
CI01000029_03698769_03707177 NA other upstream 1448643 3698572 ~ 3707883 (-)
CI01000029_04460778_04463540 FKBP1B other upstream 2202763 4460159 ~ 4463540 (-)
G154415 NA other upstream 2728528 4986108 ~ 4990990 (-)

Expression


Co-expression Network