CI01000029_02359382_02359992


Basic Information

Item Value
gene id CI01000029_02359382_02359992
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 2359013 ~ 2359992 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_02359382_02359992.mRNA
TGGCTGAGATTGGAGCACCCAGAGCTGCGAGGCTGGACTTGCCAGCTTTAATTTCCAAGTCAGCTCTGGTTTTTGTGGAAGGGTGGGGGTTTGACTCCAGAGAGCGGCACATCTCGGTCCTAATTAATCGCCTGTGTGACAGGGGTATTCCTCTGGCTGCCTGTAGATTGTGTGCTTTCACATGTGGCCCTGCGATCAGCATCTTGGAGCGACAGATATTTGATTTCCTCGGATACCAGTGGGCTCCGATCCTCACAAACTTCATCCACATCATCACAGTGATTCTAGGGCTCTTTGGAACAGTACAGTTCAGACCGCGATATGTGACCGGGGTTATGCTGTCACTTTGTTGTATTAATACCACTGGTGTCATAAAACTGTCTCGCTTTGAGTCCTAGCTAGGCACAGTGCAACACAACAATGAGCAGCAAATCTGTTCCATGATAAGTTTTTGTCCTAACATTGCAACCATGATGAGCAGCAAGACATTTTGACAGTTGTTTGGTTTCAGTCTTGTTTTATTGGCTAGCCTCACCCACAGTGGAATCTCATTGGTCCAAAATCTAGCTCCACATATGCTCTTAAACATCAAATACTGTATGTTCTGATTCGATTCTCATTCAAATTGAGTATGTCCCTAACAAGCTAAGGGAGAAAAAGTTCTAATACTCCGAGGTATGAAATATCCTTAGACAGTTTTAATCATGATGGACTAAATTGTTACAATGGTGCATTTTCTCCTTAATTTGGTTTGTAAATTAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_02359382_02359992.mRNA True 767 mRNA 0.43 3 2359013 2359992

Neighbor

gene id symbol gene type direction distance location
CI01000029_02254888_02257580 NA coding downstream 101433 2254877 ~ 2257580 (-)
CI01000029_02231187_02248416 NA coding downstream 109522 2231187 ~ 2249491 (-)
CI01000029_02203122_02221481 TPD52L1 coding downstream 137532 2202780 ~ 2221481 (-)
CI01000029_02159023_02164894 NA coding downstream 193885 2158837 ~ 2165128 (-)
CI01000029_02145528_02148347 HEY2 coding downstream 209905 2144450 ~ 2149108 (-)
CI01000029_02502175_02516608 CLVS2 coding upstream 142164 2502156 ~ 2517380 (-)
CI01000029_02532272_02537205 SMPDL3A coding upstream 172208 2532200 ~ 2537205 (-)
CI01000029_02539755_02540836 FABP7B, FABP7 coding upstream 179737 2539729 ~ 2542444 (-)
CI01000029_02589994_02592379 NA coding upstream 228458 2587549 ~ 2592379 (-)
CI01000029_02593889_02603627 HSF2 coding upstream 233399 2593391 ~ 2603627 (-)
G153134 NA non-coding downstream 131450 2225717 ~ 2227563 (-)
G152762 NA non-coding downstream 244704 2113424 ~ 2114309 (-)
G153105 NA non-coding downstream 262931 2095835 ~ 2096082 (-)
G153102 NA non-coding downstream 278729 2080072 ~ 2080284 (-)
G153085 NA non-coding downstream 421449 1934941 ~ 1937564 (-)
G153161 NA non-coding upstream 83671 2443663 ~ 2444082 (-)
G153162 NA non-coding upstream 85159 2445151 ~ 2445890 (-)
G153163 NA non-coding upstream 87138 2447130 ~ 2447590 (-)
G153164 NA non-coding upstream 87623 2447615 ~ 2447842 (-)
G153165 NA non-coding upstream 88545 2448537 ~ 2448867 (-)
CI01000029_01293143_01293964 BATF3 other downstream 1064890 1292249 ~ 1294123 (-)
G153891 NA other upstream 888785 3248777 ~ 3286554 (-)
CI01000029_03698769_03707177 NA other upstream 1346231 3698572 ~ 3707883 (-)
CI01000029_04460778_04463540 FKBP1B other upstream 2100351 4460159 ~ 4463540 (-)
G154415 NA other upstream 2626116 4986108 ~ 4990990 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location