CI01000029_09058596_09061088 (FKBP3)


Basic Information

Item Value
gene id CI01000029_09058596_09061088
gene name FKBP3
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 9058596 ~ 9061323 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_09058596_09061088.mRNA
ATGGCGGCGGATCCAGCGCGAGTGTGGAACGAGGAGCAGCTCAAGACTGAAGAAGTGGCTAAAAAAGAGCTCATCAAATTCATCCAGGACAACGCAGCACACTCGTTTCTAGCTGAACACAAACTTCTTGGAAACATCAAGAATGTGGCAAAGACAGCCAAAAAAGAGCAGCTTATTGAAGCGTATAACCAGCTGTTTGAGAGCAAGAGGTTTAAGGGCACAGAAGTGGAGTTGGTGACAGAAGAGGTTCAAGCTGTGAAAATCCACGACACTCCCAAAGAAAGCAAGATAGAGGCTGTGGATGAGGGTCCTCCGAAGTTCATGAAGTCCATCCTGAAGAAAGGAGACAAGACCAACTTCCCCAAGAAGGGCGACACGGTGAGCTGCTGGTACAGCGGGACGCTGGAGGACGGGACCGTCTTCGACACCAACATCCCCGCATCTGCTAAAAAGAAGAAACAGTCCAAACCGCTGAGCTTCAAGGTTGGGTTGGGCCGAGTGATCCGAGGGTGGGACGAAGGTCTGCTGACGATGAGTAAAGGCGAGACGGCGAGGCTGGAGATCGAGTCGGACTGGGCGTACGGGAGGAAAGGCCTTCCAGATGCAAAGTATCCTTCATTAAACCTCTCTCTGATTGATATTTTTGCAAGTGTTGATTATTTGATCAGGTTCCTCTGGCCTTAACCATCATTACCCAGAATCCCACCCAACGCAAAGCTGATATTCGAGGTGGAGCTGGTCTCTATTGATTAGTCATTTCAATCGTGACGTCTCGACCGACAGGAACCACACGACGAGCGCTGGCGGCAGTTTGGAGGGAACGTTTGTTTGAAAGGATGAAACATGTTCATTATTATTACATGTTGTTCAGTCTGACAGAGAAGTTTTCTGACTATTTTTGCATGGTTGTAAAGCTGCA

Function

symbol description
fkbp3 Predicted to enable peptidyl-prolyl cis-trans isomerase activity. Is expressed in alar plate midbrain region; immature eye; nervous system; pectoral fin musculature; and pharyngeal arch 3-7 skeleton. Orthologous to human FKBP3 (FKBP prolyl isomerase 3).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_09058596_09061088.mRNA True 919 mRNA 0.49 6 9058596 9061323

Neighbor

gene id symbol gene type direction distance location
CI01000029_08990637_09003719 NA coding upstream 54817 8990557 ~ 9003779 (+)
CI01000029_08915550_08920146 NA coding upstream 138238 8914423 ~ 8920358 (+)
CI01000029_08759743_08761002 GM2581, RPS29, RPS29.S, GM7618, GM7079 coding upstream 297402 8759696 ~ 8761326 (+)
CI01000029_08743604_08749941 WDR20 coding upstream 308259 8740734 ~ 8750337 (+)
CI01000029_08654610_08655443 NA coding upstream 402046 8652582 ~ 8656550 (+)
CI01000029_09079841_09080368 ARF6.S, ARF6.2, ARF6, ARF6.2.L, ARF6B, ARF6A coding downstream 17670 9078993 ~ 9080635 (+)
CI01000029_09091229_09095666 PELI2 coding downstream 29780 9091103 ~ 9101802 (+)
CI01000029_09132920_09139682 ACTR10 coding downstream 71247 9132570 ~ 9140319 (+)
CI01000029_09142383_09143514 NA coding downstream 81008 9142331 ~ 9143528 (+)
CI01000029_09146276_09147817 NA coding downstream 84901 9146224 ~ 9147831 (+)
G155980 NA non-coding upstream 177805 8880448 ~ 8880791 (+)
G155965 NA non-coding upstream 208004 8850127 ~ 8850592 (+)
G155953 NA non-coding upstream 220704 8823968 ~ 8837892 (+)
G155959 NA non-coding upstream 223967 8833535 ~ 8834629 (+)
G155948 NA non-coding upstream 247662 8810608 ~ 8810934 (+)
G156007 NA non-coding downstream 1415 8964818 ~ 9064541 (+)
G156087 NA non-coding downstream 55309 9116632 ~ 9116923 (+)
G156043 NA non-coding downstream 56393 9117716 ~ 9118633 (+)
G156091 NA non-coding downstream 63152 9124475 ~ 9125086 (+)
G155627 NA other upstream 1126419 7931480 ~ 7932177 (+)
G155522 NA other upstream 1420762 7634833 ~ 7637834 (+)
CI01000029_06906861_06907157 NA other upstream 2151164 6905834 ~ 6908633 (+)
G155083 NA other upstream 2568302 6431535 ~ 6490294 (+)
G155079 NA other upstream 2770198 6282685 ~ 6288398 (+)

Expression


Co-expression Network