CI01000030_07008035_07011384


Basic Information

Item Value
gene id CI01000030_07008035_07011384
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 7007833 ~ 7011384 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_07008035_07011384.mRNA
ATGGTTTGCAACCCGGCAGTAAATCTACATAAGAAGAAAACATCGCACAGGGTCCTCATTTCCGCATCTGTTGTCGGAAAAACAGTAGCAGATCAACTAACTGATTTGGGATCAAATGTGACCATAAACTGTGATCTTGATGAAAATGATGTTTATTGGATTTTACTGAAAACACCAGATCCTCCAACAGTGATTCTACGATCATTCTCAACACCCTCATCTCCTTTTTACCCTAATAATGCATTCAGAAAGAAATATTCAGTGCAATTTCTGGTTATAAATAATGTGACTGCTGATGAATTAGGAGTTTATTACTGTATGAACACACGAACACCTCCAAAATTCAGCAACAGCTCCAGACTGTACTTCAATGGACTTGTAAAGGTTTTTGTTGTTGGAAACAGAAGGTCTACAGAACGATCACAGCTCAACACTGATCCACAGCAGACACGAGTTATAGAAGAGCATCAGGACCAACTACAGCTGCAGCTGAAATTGCTACTATTTCTCTTTCAGTATGCCACAATGGACTTTTCCAAGCTGCGTAAAAATATTCGGCCCAGCCAAATCAACAGCACCTATGCTGCTCTGAACCTGCCAAAGTCATAAACACATGAGTATGACTGATGTTGTGCTTATTTTGTTCATTTTTTCTTGATGTTCACACAAGACATTAACCAGCTAAACATTCTAACAGAGATCAGGGTTTTTCAAACTGGGGTCTGTGGGAAAGACAAAAATAGTGTAAGAAAAAAAGTACTTTTTCATTATTGTTTTTGAAAACCAACTGAAAATAATGTGATTAATTAAA

Function

NR:

description
novel protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_07008035_07011384.mRNA True 811 mRNA 0.38 4 7007833 7011384

Neighbor

gene id symbol gene type direction distance location
CI01000030_07002565_07003644 NA coding downstream 3888 7002235 ~ 7003945 (-)
CI01000030_06985089_06988057 NA coding downstream 19729 6984257 ~ 6988104 (-)
CI01000030_06940324_06983295 NA coding downstream 23870 6940224 ~ 6983963 (-)
CI01000030_06919935_06930161 NA coding downstream 77505 6919413 ~ 6930328 (-)
CI01000030_06886173_06894325 NA coding downstream 113404 6886157 ~ 6894429 (-)
CI01000030_07072355_07077515 RASM, MGC80266, MRAS coding upstream 60497 7071881 ~ 7077515 (-)
CI01000030_07118097_07122890 KRT97, KRT96 coding upstream 106713 7118097 ~ 7122980 (-)
CI01000030_07154555_07155973 NA coding upstream 143171 7154555 ~ 7155973 (-)
CI01000030_07158026_07159540 NA coding upstream 146311 7157695 ~ 7159540 (-)
CI01000030_07166355_07167347 NA coding upstream 153812 7165196 ~ 7167347 (-)
G163085 NA non-coding downstream 15798 6991647 ~ 6992035 (-)
G163083 NA non-coding downstream 18576 6989016 ~ 6989257 (-)
G163082 NA non-coding downstream 19014 6988431 ~ 6988819 (-)
G163077 NA non-coding downstream 38181 6969403 ~ 6969652 (-)
G163099 NA non-coding upstream 3118 7014502 ~ 7014724 (-)
G163102 NA non-coding upstream 8619 7020003 ~ 7020262 (-)
G163103 NA non-coding upstream 8979 7020363 ~ 7020637 (-)
G163108 NA non-coding upstream 26364 7037748 ~ 7038212 (-)
G163118 NA non-coding upstream 55964 7067348 ~ 7084578 (-)
G163065 NA other downstream 82176 6924483 ~ 6925657 (-)
CI01000030_06747047_06752255 NA other downstream 255422 6746960 ~ 6752411 (-)
CI01000030_06701334_06704398 MGC53794, FAM195A, FAM195A.S, MCRIP2 other downstream 303088 6701055 ~ 6704745 (-)
CI01000030_06131710_06138371 NA other downstream 869427 6131090 ~ 6138406 (-)
G160949 NA other downstream 1207407 5797297 ~ 5800426 (-)
G163139 NA other upstream 138090 7149474 ~ 7150144 (-)
CI01000030_07736031_07737720 LSM7.L, GM13182, LSM7 other upstream 724052 7735436 ~ 7737720 (-)
CI01000030_07788973_07791700 TUSC2B, TUSC2 other upstream 777413 7788797 ~ 7792198 (-)
CI01000030_08185866_08194632 NA other upstream 1180535 8184897 ~ 8197266 (-)
G163873 NA other upstream 1922029 8933413 ~ 8933982 (-)

Expression


Co-expression Network