G159112


Basic Information

Item Value
gene id G159112
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 2877590 ~ 2877839 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU180645
GGTAGCGTTCACCTTTTCTTCTCCGGACAATCGATTTTCCAGATGTCCCAAACAGTCGCAACGGGACTTCAGCAGAGAAAATAACTTTGCACCAGTCTTCTGCTGTCCAATCCTTGTACTTCCTGCAAATTTTTGGTCTGTCCTTGATGTTTTTCTTGAAGAGAAGTGGCTTCTTTGCTGCCCTTCTTGACACCAGGCAGTTGTCCAAAAGTCTTTGCCTCACTGTGCGTGCAGATGCATCACACACACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU180645 True 250 lncRNA 0.47 1 2877590 2877839

Neighbor

gene id symbol gene type direction distance location
CI01000030_02824217_02832330 ATP5D coding downstream 44378 2823974 ~ 2833212 (-)
CI01000030_02785349_02803666 MIDN coding downstream 73924 2783629 ~ 2803666 (-)
CI01000030_02690496_02691051 NA coding downstream 186103 2690496 ~ 2691487 (-)
CI01000030_02688886_02690562 NA coding downstream 187028 2688478 ~ 2690562 (-)
CI01000030_02653346_02655442 NA coding downstream 221275 2653247 ~ 2656315 (-)
CI01000030_02978356_03013342 POLRMT coding upstream 99935 2977774 ~ 3013507 (-)
CI01000030_03213584_03216600 C10H19ORF70 coding upstream 335272 3213111 ~ 3216600 (-)
CI01000030_03273527_03314595 CELF5, CELF5A coding upstream 395688 3273527 ~ 3314595 (-)
CI01000030_03491770_03493119 CELF5A coding upstream 612280 3490119 ~ 3493741 (-)
CI01000030_03545674_03546876 RXFP3.2B coding upstream 667303 3545142 ~ 3547053 (-)
G159106 NA non-coding downstream 11339 2865602 ~ 2866251 (-)
G159105 NA non-coding downstream 15894 2861308 ~ 2861696 (-)
G159104 NA non-coding downstream 16357 2860773 ~ 2861233 (-)
G159103 NA non-coding downstream 16902 2860224 ~ 2860688 (-)
G159050 NA non-coding downstream 198872 2678489 ~ 2678718 (-)
G159122 NA non-coding upstream 45358 2923197 ~ 2923475 (-)
G159123 NA non-coding upstream 48656 2926495 ~ 2926839 (-)
G159124 NA non-coding upstream 49053 2926892 ~ 2927160 (-)
G159129 NA non-coding upstream 66623 2944462 ~ 2951345 (-)
G159152 NA non-coding upstream 183602 3061441 ~ 3108585 (-)
G158980 NA other downstream 345026 2499584 ~ 2536375 (-)
G158914 NA other downstream 425872 2450849 ~ 2451718 (-)
CI01000030_02155901_02157314 NA other downstream 718299 2155584 ~ 2157390 (-)
G158780 NA other downstream 955459 1920258 ~ 1922131 (-)
G160213 NA other upstream 588514 3466353 ~ 3469162 (-)
G160713 NA other upstream 2541280 5419119 ~ 5423513 (-)
G160712 NA other upstream 2579121 5456960 ~ 5512074 (-)
G160949 NA other upstream 2919458 5797297 ~ 5800426 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) G1164744 LOC100194703 unknown NC_048577.1 CM023231.2 31562501 ~ 31562903 (-)