G160333


Basic Information

Item Value
gene id G160333
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 3811090 ~ 3811355 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU182015
CTATTGTAATTGCTTGGCCAATTCTTCTTCTTCTCAGAAATGAATCGCATTTTTGAGGGCCTAAACATGCTCGAAAACTCATGAAACTTTGCACACGCGTCAGAAGTGGTGAAAATTTACATCTGATATGGGTTTCAGAATTAGGTGTGGCTCCATAGCGTCACCTACAAAATTTCAATTAAGCGCCCTTCGTGCTACGTTTCACGTACAGGTATGAAATTCGGTAGATGGATGTAACAGCCCAATACCTACAAAAAAGTCTCTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU182015 True 266 lncRNA 0.41 1 3811090 3811355

Neighbor

gene id symbol gene type direction distance location
CI01000030_03730577_03740244 PIAS4, PIAS4A coding downstream 70846 3729814 ~ 3740244 (-)
CI01000030_03719059_03726730 MAP2K2B, MAP2K2, MAP2K2A, MP2K2, TMEK coding downstream 83635 3718535 ~ 3727455 (-)
CI01000030_03713071_03713513 NA coding downstream 97303 3712625 ~ 3713787 (-)
CI01000030_03706598_03708425 ZBTB7A coding downstream 102357 3706341 ~ 3708733 (-)
CI01000030_03662326_03676734 TCF3B, TCF3 coding downstream 133518 3661984 ~ 3677572 (-)
CI01000030_03847350_03849167 LINGO3A, LINGO3 coding upstream 35641 3846996 ~ 3849441 (-)
CI01000030_03881956_03885985 NA coding upstream 70223 3881578 ~ 3886034 (-)
CI01000030_03906284_03908070 NA coding upstream 94744 3906099 ~ 3908772 (-)
CI01000030_03919724_03924153 OAZ1A coding upstream 108298 3919653 ~ 3924153 (-)
CI01000030_03927287_03932124 NA coding upstream 115872 3927227 ~ 3932164 (-)
G160332 NA non-coding downstream 863 3809924 ~ 3810227 (-)
G160331 NA non-coding downstream 1336 3809424 ~ 3809754 (-)
G160263 NA non-coding downstream 152370 3657035 ~ 3658720 (-)
G160298 NA non-coding downstream 233508 3577378 ~ 3577582 (-)
G160295 NA non-coding downstream 269486 3540820 ~ 3541604 (-)
G160351 NA non-coding upstream 158438 3969793 ~ 3970072 (-)
CI01000030_04012150_04013791 NA non-coding upstream 196974 4010930 ~ 4015095 (-)
G160361 NA non-coding upstream 286910 4098265 ~ 4099115 (-)
G160376 NA non-coding upstream 303392 4114747 ~ 4114974 (-)
G160381 NA non-coding upstream 307573 4118928 ~ 4119136 (-)
CI01000030_03491770_03493119 CELF5A other downstream 317990 3490119 ~ 3493741 (-)
G160213 NA other downstream 341928 3466353 ~ 3469162 (-)
G158980 NA other downstream 1278526 2499584 ~ 2536375 (-)
G158914 NA other downstream 1359372 2450849 ~ 2451718 (-)
CI01000030_02155901_02157314 NA other downstream 1651799 2155584 ~ 2157390 (-)
G160713 NA other upstream 1607764 5419119 ~ 5423513 (-)
G160712 NA other upstream 1645605 5456960 ~ 5512074 (-)
G160949 NA other upstream 1985942 5797297 ~ 5800426 (-)
CI01000030_06131710_06138371 NA other upstream 2322020 6131090 ~ 6138406 (-)
CI01000030_06701334_06704398 MGC53794, FAM195A, FAM195A.S, MCRIP2 other upstream 2889700 6701055 ~ 6704745 (-)

Expression


Co-expression Network