XLOC_000890 (gpr108)


Basic Information

Item Value
gene id XLOC_000890
gene name gpr108
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 59142783 ~ 59146016 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00001395
GACGTGTATGCGCTCACGCGTCCCGGAAGTGAAGGTGTAGCTGGAAAGAGTTTGGAAACAAACTGGCGATCAAATGAGCTCATGTCCATCGTTTGACGGACAGATCGCATTTTGACAGATCGGTGATTGACAAGCAGTGTGatgaggaggatgatgatgatgaatctGTTCGGTTTTATGCTTTTAATACTGACGGTGTCGGAAAGCAGCGCGAGGATCCATCAGCTCAAACTGCAGAATGAGACGCGGTTTATTGTCCATTTAAACACCTTTGGTTATTTTGCTAACGGCTTTCTGGAAGTCCAGCTGCTTTCTCTGAACCTTCCCCTGGAAAACAGCGACTCTGGCGACAAAGTGGGCTTCAGTTTGACACGGACCCGAGTGAACGGACTCCTGTCCTACACAGCTGAGGAGGTGGAGGAGTGCAGACTGACCAAGACCAAGAGTGAAGATGAGCTCATACTCTTCATCGACACCAAGAACCTGAAgGTGAACGTCAAACACTTAGTTGATTCTGACATCCGGCTGGAGCCCCTGACCACAGGTGGAgagaaagCACGGAGGAGAAGAGCAGATCCAGTCAGCAAAGATGAGAAAGTAGAAACTGAAGATGCCGAACAGAAGGAAACTGCGGAGAAAGAGGAGATCAAAGGCATCGCTCCGCTCAGCAGCATCGCCAacaagcagGTGGAGAGTGTGAACACGTCAACACTGGAGCTGCAGCAGCAGGGGGAGTCCTACCACTTCAGc

Function

symbol description
gpr108 Predicted to be integral component of membrane. Predicted to be active in Golgi apparatus and membrane.

GO: NA

KEGG:

id description
ko04030 G protein-coupled receptors

Ensembl:

ensembl_id ENSDARG00000096651

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00001395 True 750 mRNA 0.50 7 59142783 59146016

Neighbor

gene id symbol gene type direction distance location
XLOC_000889 NA coding upstream 4189 59137883 ~ 59138594 (+)
XLOC_000888 FP015850.1 coding upstream 11377 59131292 ~ 59131406 (+)
XLOC_000887 mfap4 coding upstream 50727 59090583 ~ 59092056 (+)
XLOC_000886 MFAP4 coding upstream 53185 59073203 ~ 59089598 (+)
XLOC_000885 MFAP4 coding upstream 70655 59067978 ~ 59072128 (+)
XLOC_000891 gpr108 coding downstream 282 59146298 ~ 59151058 (+)
XLOC_000892 soul5l coding downstream 8505 59154521 ~ 59158077 (+)
XLOC_000893 NA coding downstream 15949 59161965 ~ 59162831 (+)
XLOC_000894 NA coding downstream 102114 59248130 ~ 59251679 (+)
XLOC_000895 rdh8b coding downstream 147857 59293873 ~ 59303460 (+)
XLOC_000879 NA non-coding upstream 166096 58975017 ~ 58976687 (+)
XLOC_000878 NA non-coding upstream 183326 58956066 ~ 58959457 (+)
XLOC_000876 NA non-coding upstream 288406 58853170 ~ 58854377 (+)
XLOC_000896 NA non-coding downstream 166514 59312530 ~ 59313528 (+)
XLOC_000899 FP236157.1 non-coding downstream 374284 59520300 ~ 59522571 (+)
XLOC_000901 NA non-coding downstream 399613 59545629 ~ 59547121 (+)

Expression


Co-expression Network