XLOC_000888 (FP015850.1)


Basic Information

Item Value
gene id XLOC_000888
gene name FP015850.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 59131292 ~ 59131406 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00001394
TCCGGCAGATAActctctgcagctctcacatggttgcccactgaagctaagcagggctgcgcccggtcagtacctgaatgggagaccacatgggaaagctaggttgctgcccgCA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000112066

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00001394 True 115 rRNA 0.58 1 59131292 59131406

Neighbor

gene id symbol gene type direction distance location
XLOC_000887 mfap4 coding upstream 39236 59090583 ~ 59092056 (+)
XLOC_000886 MFAP4 coding upstream 41694 59073203 ~ 59089598 (+)
XLOC_000885 MFAP4 coding upstream 59164 59067978 ~ 59072128 (+)
XLOC_000884 pin1 coding upstream 65341 59062603 ~ 59065951 (+)
XLOC_000883 cdc37 coding upstream 117239 59007536 ~ 59014053 (+)
XLOC_000889 NA coding downstream 6477 59137883 ~ 59138594 (+)
XLOC_000890 gpr108 coding downstream 11377 59142783 ~ 59146016 (+)
XLOC_000891 gpr108 coding downstream 14892 59146298 ~ 59151058 (+)
XLOC_000892 soul5l coding downstream 23115 59154521 ~ 59158077 (+)
XLOC_000893 NA coding downstream 30559 59161965 ~ 59162831 (+)
XLOC_000879 NA non-coding upstream 154605 58975017 ~ 58976687 (+)
XLOC_000878 NA non-coding upstream 171835 58956066 ~ 58959457 (+)
XLOC_000876 NA non-coding upstream 276915 58853170 ~ 58854377 (+)
XLOC_000874 NA non-coding upstream 349000 58778053 ~ 58782292 (+)
XLOC_000871 NA non-coding upstream 462217 58646685 ~ 58669075 (+)
XLOC_000894 NA non-coding downstream 116724 59248130 ~ 59251679 (+)
XLOC_000896 NA non-coding downstream 181124 59312530 ~ 59313528 (+)
XLOC_000899 FP236157.1 non-coding downstream 388894 59520300 ~ 59522571 (+)

Expression


Co-expression Network