XLOC_000883 (cdc37)


Basic Information

Item Value
gene id XLOC_000883
gene name cdc37
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 59007536 ~ 59014053 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00001382
ATGACGACCATCGACTACAGTGTGTGGGATCATATCGAGGTGTCCGACGATGAGGACGACACACACCCGAACATCGACACACCGAGTCTGTTCCGCTGGAGAcaccagGCGCGGGTGGAGCGGATGGAGGCGTTCACACAGAAGGGTGTGGAGCTGGAGAAGAGCCTGATGGAGAGCCGGAGGAGGCTGGCGGAGGCGCAGCGGCGGGTGCAGGAGctcagctcctcctcctcctccactgaGCTGAGCCGTGCACAGGCCGAGGAGAAGCAGCTGAAGAAGGAGGAGCGCAGCCTGCAGAGGAAGATGGAGGAGCACCGGGCAGAGGAGAAGAAGATGCCCTGGAACGTGGACACACTCAGCAGAGAGGGCTTCagcaagAGTGTGGTGAACGTGAAGccggagcagaagcaggagacggaggaggagaaggaggagaaaCACAAGACCTTCGTGGAGAAACACGAGAAACAGATCAAACACTTCGggatGCTGCGGCGCTGGGACGACTCACAGAAGTACCTGTCTGATAATCCTCACCTGGTCTGTGAAGAAACGGCAAATTACCTGGTGATCATGTGCATCGACCTGGAGGTGGAGGaggtactgtgtgtgtgtgtgtgtgtgtgtgaattgactgtgtgtttatgtgtgtgtgatctgtaCTCGAccatgtTAATTGAccgtgtCTGCTTCCGCCAGTTCTTCACCAAAatcaagacggCCGATCAGCAGTATCAGGACGCGTTTAACGATGAGCTGGAGTCGTTTAAGGAGCGCGTTCGCGGACGAGCGAAGATCCGCATCGAGAAGGCCATGAAGGAGTACGAGGAGGAGGAGCGGCAGAAGAGGCTGGGGCCTGGAGGACTGGATCCAGCGGAGGTGTACGACACACTGCCGGCGtcacacacacacacacacacacacacacacacacacacaccagcggaGGTGTACGACACACTGCCGGCGgaGGCTAAGCTCCACATGAAGCGCTGCATTGACTCTGGTCTGTGGGTGCCGAACGCTCGCGCTGATGAAGACGGAGATAAAGAGGAGGCGCAGTATGAGGAGCTGCAGAAGGAGGAGCAGTGA

Function

symbol description
cdc37 Predicted to enable protein kinase binding activity. Predicted to act upstream of or within cell division. Predicted to be located in cytoplasm. Orthologous to human CDC37 (cell division cycle 37, HSP90 cochaperone).

GO:

id name namespace
GO:0007049 cell cycle biological_process
GO:0051301 cell division biological_process
GO:0019901 protein kinase binding molecular_function

KEGG:

id description
ko04151 PI3K-Akt signaling pathway
ko03110 Chaperones and folding catalysts
ko03029 Mitochondrial biogenesis
ko00536 Glycosaminoglycan binding proteins

ZFIN:

id description
ZDB-GENE-040426-940 Predicted to enable protein kinase binding activity. Predicted to act upstream of or within cell division. Predicted to be located in cytoplasm. Orthologous to human CDC37 (cell division cycle 37, HSP90 cochaperone).

Ensembl:

ensembl_id ENSDARG00000099301

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00001382 True 1095 mRNA 0.57 10 59007536 59014053

Neighbor

gene id symbol gene type direction distance location
XLOC_000882 CABZ01083166.1 coding upstream 7297 58990121 ~ 59000239 (+)
XLOC_000881 thumpd1 coding upstream 21651 58981985 ~ 58985885 (+)
XLOC_000880 eri2 coding upstream 28085 58977262 ~ 58979451 (+)
XLOC_000879 NA coding upstream 30849 58975017 ~ 58976687 (+)
XLOC_000878 NA coding upstream 48079 58956066 ~ 58959457 (+)
XLOC_000884 pin1 coding downstream 48550 59062603 ~ 59065951 (+)
XLOC_000885 MFAP4 coding downstream 53925 59067978 ~ 59072128 (+)
XLOC_000886 MFAP4 coding downstream 59150 59073203 ~ 59089598 (+)
XLOC_000887 mfap4 coding downstream 76530 59090583 ~ 59092056 (+)
XLOC_000888 FP015850.1 coding downstream 117239 59131292 ~ 59131406 (+)
XLOC_000876 NA non-coding upstream 153159 58853170 ~ 58854377 (+)
XLOC_000874 NA non-coding upstream 225244 58778053 ~ 58782292 (+)
XLOC_000871 NA non-coding upstream 338461 58646685 ~ 58669075 (+)
XLOC_000889 NA non-coding downstream 123830 59137883 ~ 59138594 (+)
XLOC_000893 NA non-coding downstream 147912 59161965 ~ 59162831 (+)
XLOC_000894 NA non-coding downstream 234077 59248130 ~ 59251679 (+)
XLOC_000896 NA non-coding downstream 298477 59312530 ~ 59313528 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000365_00040221_00045449 CDC37 coding CI01000365 null 39830 ~ 45449 (-)
bowfin (Amia calva) G49340 cdc37 unknown CM030126.1 CM030126.1 2209483 ~ 2211514 (+)