XLOC_000879


Basic Information

Item Value
gene id XLOC_000879
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 58975017 ~ 58976687 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00003275
CGCTGTCCCAGGTGACTCTGTGGTTTTCGGGCAGCACTCTGCACTGGATCAGCCATGCCGCACACTGTCTCCACATCTCCATCTCCAAACGCAGCTCTGGGGACCTTCAGTGAGCCTCAAACTCTCCTGAGCAGCTCATCAGCACCAGAACTACAGATCCCACATGAGGAGGAGGACTACAGGAACACTCAGAGCTCTCGACCACCACCACCGCATCAACACACAcgctctctatatatatatatatatatatatatgagtgagtgtctctatacacacacacacactctatatatGTCTATATGTGTCTCTCTagatctctctctctgtctccagCTCTCGGACTTCTTTATCTTGAAATGTTTGGAGATTTTAAGATTATATCACAAGATCCAAAGATTTAAtcaaaaattgtgaaaaattaataattaattatctctctctctacctctccctctctctctgtctgacCGTTGTCTTCGCCGAGGTCTTCTCCTTACGAGTGTGTGTCTTCGCCAAGGTCTTCTCCTTACGAGTGTGTTcggcgggtgtgtgtgtgtcttcgtcCGAGGTCTTCTCCTTACGAGTGTGTTcggcgggtgtgtgtgtgtcttcgtcCGAGGTCTTCTCCTTACGAGAGTGCTCGgcgggtatgtgtgtgtgtcgtcGCCGATGTCTTCCCCTTGCGAGTGTGCCTcggcgggtgtgtgtgtgtcgtccCCGATGTCTTCCCCTTGCGAGTGTGCCTcggcgggtgtgtgtgtgtcgtccCCGATGTCTTCCCCTTGCGAGTGTGCCTcggcgggtgtgtgtgtgtcgtccCCGATGTCTTCCCCTTGCGAGTGTGCCTcggcgggtgtgtgtgtgtcgtcgTCTTGCTTTCCCTTCGTTCGTCTGCTGCTGCTCTGCAACACTGCAACTGAGGAAGCCTTTCAACTGCAAAACAACTTCCTCTTTCCTCtatagcgcacacacacacacacacacacacacacacactcacacacacacatctgacacTTAACTTGCATGTGCTGCTGCTGCAGAGTGTGTGgtttctgtgagtgtgtgtaaagTGAAATATGAGTGTGATTGTGTGTAAGTGTAACatgcatgtgaatgtgtgtgtgtgtgtgtgtg

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00003275 True 1140 lncRNA 0.50 3 58975017 58976687

Neighbor

gene id symbol gene type direction distance location
XLOC_000878 NA coding upstream 15560 58956066 ~ 58959457 (+)
XLOC_000877 trip10b coding upstream 39119 58922027 ~ 58935898 (+)
XLOC_000876 NA coding upstream 120640 58853170 ~ 58854377 (+)
XLOC_000875 tmed1b coding upstream 124331 58840889 ~ 58850686 (+)
XLOC_000874 NA coding upstream 192725 58778053 ~ 58782292 (+)
XLOC_000880 eri2 coding downstream 575 58977262 ~ 58979451 (+)
XLOC_000881 thumpd1 coding downstream 5298 58981985 ~ 58985885 (+)
XLOC_000882 CABZ01083166.1 coding downstream 13434 58990121 ~ 59000239 (+)
XLOC_000883 cdc37 coding downstream 30849 59007536 ~ 59014053 (+)
XLOC_000884 pin1 coding downstream 85916 59062603 ~ 59065951 (+)
XLOC_000871 NA non-coding upstream 305942 58646685 ~ 58669075 (+)
XLOC_000865 NA non-coding upstream 379250 58586353 ~ 58595767 (+)
XLOC_000888 FP015850.1 non-coding downstream 154605 59131292 ~ 59131406 (+)
XLOC_000889 NA non-coding downstream 161196 59137883 ~ 59138594 (+)
XLOC_000893 NA non-coding downstream 185278 59161965 ~ 59162831 (+)
XLOC_000894 NA non-coding downstream 271443 59248130 ~ 59251679 (+)
XLOC_000896 NA non-coding downstream 335843 59312530 ~ 59313528 (+)

Expression


Co-expression Network