G162379


Basic Information

Item Value
gene id G162379
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 10668399 ~ 10668676 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU184409
ACAAAAATAACGACTTTATTCAATAATATCTTCTCTTCTGTGTAATTCTCATACATTGTTTACGTTCAGCACTTCCAGGTTCTACGCCAGAACGCCGACTCATTATTGGCCGGCTCCTGCGTCAACATCACACATATGTGTTGTGCTGATCACGTGATCAGCTTCAGCCAATACTGAGCCGGCATTCGGACGTAAACACGGAAGCGCTGCACTGTGCTTTACTGCAGCAACTGCGTAAAGATAATGACAGGGAAGAGAAGATACTGTTGAATAAAGTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU184409 True 278 lncRNA 0.44 1 10668399 10668676

Neighbor

gene id symbol gene type direction distance location
CI01000030_10646148_10649874 NA coding upstream 18462 10645873 ~ 10649937 (+)
CI01000030_10642268_10643835 NA coding upstream 24085 10642268 ~ 10644314 (+)
CI01000030_10628602_10631875 BCDIN3D coding upstream 36287 10628602 ~ 10632112 (+)
CI01000030_10605608_10626845 CERS5 coding upstream 41121 10603370 ~ 10627278 (+)
CI01000030_10596446_10602032 NA coding upstream 64762 10596217 ~ 10603637 (+)
CI01000030_10689813_10702377 NA coding downstream 20772 10689448 ~ 10702993 (+)
CI01000030_10716988_10729316 NA coding downstream 47753 10716429 ~ 10729662 (+)
CI01000030_10738658_10751094 NA coding downstream 69411 10738087 ~ 10751548 (+)
CI01000030_10753303_10762765 NA coding downstream 84627 10753303 ~ 10762765 (+)
CI01000030_10766284_10769462 NA coding downstream 97608 10766284 ~ 10769484 (+)
G162365 NA non-coding upstream 17528 10650424 ~ 10650871 (+)
G162722 NA non-coding upstream 26366 10641805 ~ 10642033 (+)
CI01000030_10537146_10539791 NA non-coding upstream 44591 10536191 ~ 10540258 (+)
G162694 NA non-coding upstream 104082 10522304 ~ 10564317 (+)
G162366 NA non-coding upstream 152583 10513888 ~ 10515816 (+)
G162356 NA non-coding downstream 145 10668821 ~ 10669837 (+)
G162306 NA non-coding downstream 36245 10704921 ~ 10712174 (+)
G162793 NA non-coding downstream 120091 10788767 ~ 10789149 (+)
G162794 NA non-coding downstream 125134 10793810 ~ 10794162 (+)
G162795 NA non-coding downstream 125567 10794243 ~ 10794464 (+)
CI01000030_10473378_10509560 NA other upstream 166756 10471835 ~ 10511071 (+)
G162297 NA other upstream 447175 10133299 ~ 10221224 (+)
CI01000030_10039688_10047019 NA other upstream 622516 10039358 ~ 10047210 (+)
G162449 NA other upstream 1311385 9356403 ~ 9357014 (+)
G162137 NA other upstream 2096673 8568010 ~ 8571726 (+)
G162821 NA other downstream 197336 10866012 ~ 10868440 (+)
CI01000030_11362386_11380216 CALR3A, CALR3, CALR3B other downstream 672079 11362114 ~ 11380772 (+)
G162951 NA other downstream 823925 11492601 ~ 11496119 (+)

Expression


Co-expression Network