G167231


Basic Information

Item Value
gene id G167231
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000032
NCBI id null
chromosome length 4185905
location 3846316 ~ 3850863 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU189973
AAAAAAAAAAAAAAAAAAAATTAACGGTGTTCATTGAAATATCTAACCGCTGCAGGTACAAAACATCTTCTCATTCGTTCACTAGAGCACCGAGGCATTATCAATCACTCACTGAAAGAGCTTCTAAGTCCTTTAAAAATGTTGTGTAGTGGATGGCTTTCGAAAAGCAAAACGATTTTTAGTTTTGACCTTGTCCTCTTCTCCACAATGACCTCAAGTAAGTCTGGAGTAAGACCAATAATCGAACCAGCCCTCTTGATCAGCATATTTATCCTATTTTTGTCCTCAACAGGTATGCTTATTACCAAGCCTTACAAACTGTGGTCGTGATAAGAGGTAATCTAAAATCCAGGAAATGGTTGTATTGTGCAGTTTAAAATCGATTAATTTATTGGCTAAAATATGTGGCTGTATAGTGTTAAAAGCACTCGAAAAATCAAAAAAACATGATCCTGACAGAGCTGGTAGTAGTTTCAAGATGACTGTAAATGTTATGGACCATAAAAAGTAGAGCATCATCTACCCCAACACCCTTTCTATATGCAAATTGCAAGGGGTCCTGAAAAACAGACACCTGCCTAGTCAGGTGATCCAGTACAACCCCCTCAAAACACTTCATAATGTGTGAAGTCAAAGCAATAGGCCTCAGATTAGTAAGGTTGTTGGACACCTTAGCTTTTTTGGAAAAAGGGACAAGGCAAGATGTTTTCCACATAACTAGGATCTTAGCAGAGGACAGACACAAAGAAAACAATGAATGAAGGACGGAGCATAGCTGGTCAGCAAACACTTTAAGGGTGCGTGGATAAACACCATCGGGGCCTGCTGCCTTAGTAGATTTAATACGCCTTAACTGCTGACGAACCTCTTCAATGTTAAGATTAATAGCTAGGCTACAATCATCAAAGCTGCTCTGCCTAAGATTAGAAAGGACATGCTCATGTAGAGAAGAAAAATCTAATTCATCAAACCTGGCAAAAAAAGCATTGGCATCATTAGCCTGTATACCCAATTGACATAAACTGGGATTACTGGTCCCATATCCAGTAATAGACTTCATACCATTCCATAGCCCTCTTGTGTTGGTACAGGACATATTTCCTTCAACCCTTTCCTTATATTTTTGTTTGCCCTGTCTGATAATGACTTTCAGCTCTCTTTGAGCATCTTTAATCCTTTCTTTATCACCACTATAAAAAGCTTTCTTCTTATTAATAGCAGCTTTAACTTCTCTGGTAACCCATGGTTTGTTATTGGGAAAAATTTTGATTTGTTTACTAGGAATTAAAGACTCGACACAATAATTAATATAACAAGTCACTTTGTCAGAGATACTGTCGAGATCACTGTCTCCATCAAAGAACACATTCCAATCTGTTTTTGTCACCCCTCGTAGGACACGTCACCATTTGTTTAAAAGACGGTAAAGTGGTGGAGAGAGAGCAGTGATTAAAGTCCCCGTTTAAGATAACCAGTGCATCAGGAGAAGAGCACTGTAGGTTATGCATAATTCTTGAAATTGTCTCAGTGGCACATTTCCCATTACCCGATGGAGGAATGTACGCCACCATAACAATGACATGGGAAAACTCCCTGGGTAGATAGTAAGGTCGACAGCTCACTGCAATGAGCTCAATGTTCGGGGCACAAACTCTCTCTTTTACTGTAACATGTTGAGTATGACACCACCGGTCATTCACATACAGGCAGACACCTCCACCTTGCTTCATACCCGTGCTTGCTTGCTCTCTGTCCACCCTATGAAAAGTGAAACCTTCAATATCCACATGAGAATCAGGTATCCTGTCCGACAGCCACGTCTCAGAAAAACAGATTAAACTGGTCTGCCGCTGACAGCGCTGACAGTTTCCCTTTCATCAACGTGGTAGCCTTACGTCCTCGGCTATGTTCCCCTTGTTCGCGGGAAGTTTGTCCGCGTCCGTTGGAGAAACTGTTACACTGTCATCTCCGGCGATATTTGGAGTTGCATCGCCACCTCTCAGGGCCTTTTTTATGCTCGATTGCACTGTTTTCTGCCTACAAGCCATGTTTCTGTAGCTAAAACTCTTCTCTACTTCTTAGAAAAGAAGAGTTGTCGAGTTAGCCGTTTAAGATTATCAGTAAGAATAAGTTTAAACTATGCCGCTACAAGCAGTGCTAAACTACGCTGCCATCCGCCTAGACCACGTCATGTGACTGAAGTTTTTTTATTCTTAAGTTCTTTATTCTAATTGTGATACAGTGTCTGTGACTATTAAACTGCAAAAAGACTGTTTAAATATGAATCCTGCAAGTTTTGTGTGTCTCAGTGTGAATTAATGGGGCAGATCAATGCGTGTTCCGTTTACTACACATAACTTACATTAGTAAATTATCATATTGGCTATTCCCAAAATATTGATATACTGAGATGAGTGAAATCGACTGAAATACATAATAAATACCGAAATACAATGTGTTAGCAATGTATTAAACTGCACATTAACATTTAGGCTCTATAATTTAACAAATATAATATATAAAATGCCATAGAGGTAATATGAATGTTCAGACGCTTAGCATCACAGAAATACATTATATTTTAAAGTATATTAAAATAGAAAACCATTATTTTAAACTGTGATAATATTTCACAGTATAGTTTTTTTTCTCTCTCTCTCTCATTCTCTCTCTCTGTATTTTTGATCAAATAAATGCAGGCTTAATAAGCATTGAGCATGAGACTACTTTTAAAAACATTAAAAATAGTAATATGTGTCCAATCTTTTGACTGGTACTGTAATTTAAAATGTAAAGGCCTATACAAAATTTTCTACAACATGATGTGCAATAATATGTGCATGCATGAGATCACAAAAATCATGTTTTCTGTTAAGAGTGGACATTATATTAACGTTAATACAATAGCTGATGATCCTGCTGATTTTTTTTTTTTTTTTTTTTTTTTTATCTCACAGATTTAAGAAACATAGTGACCAGATATTGGCACACATTGGACTGCATGCATATGATACTGAGATCACTGACTGGAAGCAGGAAAGTGTTTTTTTTTCTTATTATTCTTCTTTTCTCCAGTGCAGAAACAGCAAATGCCTGTTAAGTGATGTTCACATATATCTTTGAACAAGATCTATTTCCAGGTATAACTGTGTACTCAAAATATGTCTTTGACTCTCATTTATATAGTTAACTATATGCTAAATAAACTACAAACAAAAAATGATATATTTCTTTTGTCATTTTATTCTTTCTTAGTTCACTCAGTCACATTCCTAACTGAATGACTCATTATGCGGCTCATTAGGGGCAGGGTCTTAATCTCCTCAGGTGTTAATCATAGCATTATTCATGAAGACTCATGCCTCCCTGCATATAGCCTTTATAAACAAAAAGTGTCTTAGAAATTTAAAATGTCTACTTGTGTACAAGTAGGCAGAAAGATTTCTACATCATTGTGAAGCAAAAACTCTAGACTAAAATATACAGTTCCCAAAAGTCTTGTGAAAAAAAAAATGTTTAGTTTGTTTTGAGGCCTTATTTCAGTGACTTTTTTTCCAAAACTACGCATATACGTAATTCTCTCAAAAATACAAACAGGTACATTCTTGTTGCTCACATATTATTGAAGCCTAGTTTCTGCTGAATACAGTGTAATGAGACTTTTGTCATTAATATGTTTATAAGCAACTGAAAAAAGCACAAATGTCAGGGCATGTCAAAACTACTCCAGGACCCTAAATCAGCCTCAGACCCCAGAGGGTTAACATTAACATAAAAATGTTGTAGAAGTATTGTTCATTGTTGCCTTATTTTAACTAATTTAGTTAACCAATGTTATCTAATGAAACATTAGATAACATTGGTTAACTAATTGGTTAACATTTTTTTTTTTTTTTTTTTTTTTTTAAGAATGGTATACAATGGTATACAATTTTACAAAGTCGTCATTTGTAAGCCATCTACTAGCCATTTAACATCTGGCTTTGACAGCTAGTAGAGTATAACCATTAGATGTAAAATTATGTTATTAACACAAAATAATTCTTTTAGATTTCTGCAACACACCAAACATGGATGACAAGAGTGAAGAACAAGGTTATGGCTCATCAATTTGAAGTTTACCTGTGCCTGCAGTGCAACCCTCTCTGGTCCCGGATGTCTACAGGTTTTGGACTCATGCCTCAAGGTTTCTGCGCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU189973 True 4198 lncRNA 0.36 3 3846316 3850863

Neighbor

gene id symbol gene type direction distance location
CI01000032_03535729_03536058 NA coding upstream 309453 3535729 ~ 3536863 (+)
CI01000032_03326549_03327076 NA coding upstream 517452 3326549 ~ 3328864 (+)
CI01000032_03323107_03325296 NA coding upstream 520679 3323107 ~ 3325637 (+)
CI01000032_03210864_03212974 TMEM129 coding upstream 632152 3210864 ~ 3214164 (+)
CI01000032_03168377_03169554 NA coding upstream 676569 3168281 ~ 3169747 (+)
CI01000032_03959089_03961976 NA coding downstream 108076 3958939 ~ 3962210 (+)
CI01000032_04115597_04116265 NA coding downstream 264734 4115597 ~ 4116316 (+)
CI01000032_04142554_04144115 NA coding downstream 288423 4139286 ~ 4144298 (+)
G167225 NA non-coding upstream 7264 3838557 ~ 3839052 (+)
G167221 NA non-coding upstream 14422 3829502 ~ 3831894 (+)
G167196 NA non-coding upstream 24047 3794036 ~ 3822269 (+)
G167171 NA non-coding upstream 64414 3744075 ~ 3781902 (+)
G167179 NA non-coding upstream 79033 3762765 ~ 3767283 (+)
G167250 NA non-coding downstream 27367 3878230 ~ 3878566 (+)
G167259 NA non-coding downstream 40221 3891084 ~ 3948931 (+)
G167274 NA non-coding downstream 65741 3916604 ~ 3916896 (+)
G167305 NA non-coding downstream 114224 3965087 ~ 3965328 (+)
G166765 NA other upstream 889103 2956788 ~ 2957213 (+)
G166734 NA other upstream 996632 2835314 ~ 2849684 (+)
CI01000032_02773889_02774396 NA other upstream 1070268 2773889 ~ 2774501 (+)
CI01000032_01698448_01701006 NA other upstream 2145028 1698448 ~ 1701288 (+)
G165570 NA other upstream 2488749 1349578 ~ 1357567 (+)

Expression


Co-expression Network